RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 HSFX1Q9UBD0 423 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 USP22Q9UPT9 525 aa14.83□□□□□ -0.04
HOXC11-202ENST00000546378 UBA6A0AVT1 1052 aaPredicted RBP14.82□□□□□ -0.04
HOXC11-202ENST00000546378 PTGES3LE9PB15 166 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 H3BMM5 538 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 NRP2O60462 931 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 ESRRGP62508 458 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 FKBP1BP68106 108 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 CLDN10P78369 228 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 LPIN1Q14693 890 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 SLC44A4Q53GD3 710 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 RBM20Q5T481 1227 aaKnown RBP14.82□□□□□ -0.04
HOXC11-202ENST00000546378 TMEM26Q6ZUK4 368 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 JADE3Q92613 823 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 VPS33AQ96AX1 596 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 TINF2Q9BSI4 451 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 SMARCAD1Q9H4L7 1026 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 POLR1BQ9H9Y6 1135 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 PIGVQ9NUD9 493 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 STK39Q9UEW8 545 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 A0A0U1RQS6 177 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 MRASO14807 208 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 SNAI1O95863 264 aaPredicted RBP14.82□□□□□ -0.04
HOXC11-202ENST00000546378 C1QAP02745 245 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 CTSHP09668 335 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 ZNF23P17027 643 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 KCNA5P22460 613 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 PPARGP37231 505 aaPredicted RBP14.82□□□□□ -0.04
HOXC11-202ENST00000546378 TKTL1P51854 596 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 CD300CQ08708 224 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 ZBTB17Q13105 803 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 ITGADQ13349 1161 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 PIM3Q86V86 326 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 LRRC40Q9H9A6 602 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 TNFRSF12AQ9NP84 129 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 TIMM22Q9Y584 194 aa14.82□□□□□ -0.04
HOXC11-202ENST00000546378 KLF11O14901 512 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 BIRC5O15392 142 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 DLX3O60479 287 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 YBX1P67809 324 aaKnown RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 SDHAF4Q5VUM1 108 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 MAML3Q96JK9 1138 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 LHX5Q9H2C1 402 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 MPP6Q9NZW5 540 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 RSL24D1Q9UHA3 163 aaKnown RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 ACOT9Q9Y305 439 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 NME7Q9Y5B8 376 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 MAGED1Q9Y5V3 778 aaPredicted RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 A8MU76 341 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 MSI1O43347 362 aaKnown RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 STRNO43815 780 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 HUS1O60921 280 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 LGALS2P05162 132 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 TKTP29401 623 aaKnown RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 BEX3Q00994 111 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 NRG1Q02297 640 aaPredicted RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 MBTD1Q05BQ5 628 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 MGAT5BQ3V5L5 792 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 GRAMD4Q6IC98 578 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 AAGABQ6PD74 315 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 EPGNQ6UW88 154 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 GCOM2Q9BZD3 368 aaPredicted RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 ULBP1Q9BZM6 244 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 MOCS1Q9NZB8 636 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 PCDHB12Q9Y5F1 795 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 MCM3APO60318 1980 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 BCLAF3A2AJT9 711 aaKnown RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 PRORSD1PA6NEY8 169 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 UBDO15205 165 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 FBXO21O94952 628 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 AHSGP02765 367 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 CCDC166P0CW27 439 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 SMPD1P17405 629 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 BFSP2Q13515 415 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 FAM110CQ1W6H9 321 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 ZNF792Q3KQV3 632 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 CNSTQ6PJW8 725 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 GPR141Q7Z602 305 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 RALGPS2Q86X27 583 aaPredicted RBP14.81□□□□□ -0.04
HOXC11-202ENST00000546378 KLHL5Q96PQ7 755 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 PLEKHG4BQ96PX9 1271 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 PDZD7Q9H5P4 517 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 PRDM8Q9NQV8 689 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 ERAP1Q9NZ08 941 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 AASSQ9UDR5 926 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 PPME1Q9Y570 386 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 STYXL1Q9Y6J8 313 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 U3KQV3 271 aa14.81□□□□□ -0.04
HOXC11-202ENST00000546378 FAM95CA0A1B0GW59 222 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 G3V2L1 256 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 H3BRB1 525 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 MAP4P27816 1152 aaKnown RBP14.8□□□□□ -0.04
HOXC11-202ENST00000546378 APLP1P51693 650 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 TAS2R39P59534 338 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 TSPY1Q01534 308 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 MADCAM1Q13477 382 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 IMPG1Q17R60 797 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 MILR1Q7Z6M3 343 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 RASAL3Q86YV0 1011 aa14.8□□□□□ -0.04
HOXC11-202ENST00000546378 IFNLR1Q8IU57 520 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms