RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 C1orf74Q96LT6 269 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 C11orf70Q9BRQ4 267 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 GPR174Q9BXC1 333 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 NRSN2Q9GZP1 204 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 PABPC3Q9H361 631 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 AKTIPQ9H8T0 292 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 SGK2Q9HBY8 427 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 ANLNQ9NQW6 1124 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 FZD4Q9ULV1 537 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 MYO6Q9UM54 1294 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 TBC1D30Q9Y2I9 924 aa7.88□□□□□ -1.15
SNHG1-223ENST00000545440 MAP1BP46821 2468 aaKnown RBP7.88□□□□□ -1.15
SNHG1-223ENST00000545440 ACACBO00763 2458 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 IGLV3-10A0A075B6K4 115 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 A0A1B0GTW7 788 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 PRAMEF27A3QJZ7 478 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 FAM221AA4D161 298 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 SMTNL1A8MU46 457 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 TTC34A8MYJ7 566 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ENDOD1O94919 500 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ADCY5O95622 1261 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 SEMA4FO95754 770 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 CALB1P05937 261 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 SYPP08247 313 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 CCDC172P0C7W6 258 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 GLB1P16278 677 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 FERP16591 822 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 CSRP1P21291 193 aaKnown RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 SDC4P31431 198 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 NNMTP40261 264 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 PTPN9P43378 593 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 STK19P49842 368 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ATXN3P54252 364 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ETF1P62495 437 aaKnown RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 PTP4A2Q12974 167 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF177Q13360 481 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 CST6Q15828 149 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 CLEC16AQ2KHT3 1053 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 KLHL40Q2TBA0 621 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 C9orf64Q5T6V5 341 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 DCAF12L1Q5VU92 463 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 LRRC31Q6UY01 552 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 MON1BQ7L1V2 547 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 SETD3Q86TU7 594 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ZCCHC9Q8N567 271 aaKnown RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 DCAF4L2Q8NA75 395 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 C3orf20Q8ND61 904 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 PTPRN2Q92932 1015 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 GAL3ST3Q96A11 431 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ALG14Q96F25 216 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 CFAP57Q96MR6 1250 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 HAPLN3Q96S86 360 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 FEM1AQ9BSK4 669 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 FUCA2Q9BTY2 467 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 TMPRSS13Q9BYE2 586 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ZDHHC5Q9C0B5 715 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 BTBD1Q9H0C5 482 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 SIK2Q9H0K1 926 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 KCNK4Q9NYG8 393 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 SLC25A13Q9UJS0 675 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 VPS28Q9UK41 221 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 HS3ST2Q9Y278 367 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 OR51B4Q9Y5P0 310 aa7.87□□□□□ -1.15
SNHG1-223ENST00000545440 ARID1BQ8NFD5 2236 aaPredicted RBP7.87□□□□□ -1.15
SNHG1-223ENST00000545440 A0A1W2PQC6 194 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 C2CD4BA6NLJ0 364 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 DRGXA6NNA5 263 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 UPK3BL1B0FP48 263 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 UPK3BL2E5RIL1 263 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 E9PAM4 449 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ALOX15BO15296 676 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 BCAT2O15382 392 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-223ENST00000545440 CNTN5O94779 1100 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 KCNK5O95279 499 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ECEL1O95672 775 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 RHOCP08134 193 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 CEACAM1P13688 526 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 PTMSP20962 102 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 C5AR1P21730 350 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ACSL1P33121 698 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 NOVA1P51513 510 aaKnown RBP7.86□□□□□ -1.15
SNHG1-223ENST00000545440 GRIK2Q13002 908 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ARL13BQ3SXY8 428 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 FILIP1LQ4L180 1135 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ALFQ53S48 1182 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 PPP1R2P3Q6NXS1 205 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 LRSAM1Q6UWE0 723 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF783Q6ZMS7 281 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 GK5Q6ZS86 529 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 STRADAQ7RTN6 431 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 DSG4Q86SJ6 1040 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 C14orf80Q86SX3 495 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 FAM124AQ86V42 546 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 FAM131BQ86XD5 332 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 MMAAQ8IVH4 418 aaKnown RBP7.86□□□□□ -1.15
SNHG1-223ENST00000545440 HDDC3Q8N4P3 179 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 SH2D3CQ8N5H7 860 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 MINDY1Q8N5J2 469 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms