RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 VOPP1Q96AW1 172 aa20.28■□□□□ 0.84
LPCAT3-211ENST00000543794 CCDC3Q9BQI4 270 aa20.28■□□□□ 0.84
LPCAT3-211ENST00000543794 ZDHHC6Q9H6R6 413 aa20.28■□□□□ 0.84
LPCAT3-211ENST00000543794 PPARGC1AQ9UBK2 798 aaKnown RBP20.28■□□□□ 0.84
LPCAT3-211ENST00000543794 APOBEC3BQ9UH17 382 aaKnown RBP20.28■□□□□ 0.84
LPCAT3-211ENST00000543794 GGT7Q9UJ14 662 aa20.28■□□□□ 0.84
LPCAT3-211ENST00000543794 AJAP1Q9UKB5 411 aaPredicted RBP20.28■□□□□ 0.84
LPCAT3-211ENST00000543794 ACTL7AQ9Y615 435 aa20.28■□□□□ 0.84
LPCAT3-211ENST00000543794 PYCARD-AS1I3L0S3 204 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 NTN3O00634 580 aaPredicted RBP20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 NEMP1O14524 444 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 YY2O15391 372 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 EFSO43281 561 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 SLC28A2O43868 658 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 WISP1O95388 367 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 ITGA2BP08514 1039 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 GKP32189 559 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 CDH5P33151 784 aaPredicted RBP20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 THOP1P52888 689 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 YPEL5P62699 121 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 CREBRFQ8IUR6 639 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 PHACTR4Q8IZ21 702 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 TMEM35BQ8NCS4 154 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 C18orf8Q96DM3 657 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 CCNL2Q96S94 520 aaPredicted RBP20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 LRRC61Q9BV99 259 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 TM6SF2Q9BZW4 377 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 CLPBQ9H078 707 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 SIX2Q9NPC8 291 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 DNAJC12Q9UKB3 198 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 PADI4Q9UM07 663 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 ITM2BQ9Y287 266 aa20.27■□□□□ 0.84
LPCAT3-211ENST00000543794 AREL1O15033 823 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 ANXA6P08133 673 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 FLT3P36888 993 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 ACVRL1P37023 503 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 BPIFB4P59827 614 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 C1QBPQ07021 282 aaKnown RBP20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 SPIDRQ14159 915 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 ZSCAN23Q3MJ62 389 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 FAM102AQ5T9C2 384 aaPredicted RBP20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 ESRP1Q6NXG1 681 aaKnown RBP20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 XYLT1Q86Y38 959 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 FAM71AQ8IYT1 594 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 RYBPQ8N488 228 aaPredicted RBP20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 ARHGEF26Q96DR7 871 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 LIN37Q96GY3 246 aaPredicted RBP20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 SLC13A1Q9BZW2 595 aa20.26■□□□□ 0.83
LPCAT3-211ENST00000543794 KRT10P13645 584 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 TSHRP16473 764 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 IGFALSP35858 605 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 FAXCQ5TGI0 409 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 TRNP1Q6NT89 227 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 DRC7Q8IY82 874 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 OR6K2Q8NGY2 324 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 RWDD2AQ9UIY3 292 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 TMEM59LQ9UK28 342 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 ATXN7L1Q9ULK2 861 aaPredicted RBP20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 PCDHGA7Q9Y5G6 932 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 SPTA1P02549 2419 aa20.25■□□□□ 0.83
LPCAT3-211ENST00000543794 KIF26BQ2KJY2 2108 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 TOR1BO14657 336 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 POP4O95707 220 aaKnown RBP20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 GSRP00390 522 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 PNMA6AP0CW24 399 aaPredicted RBP20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 ETFBP38117 255 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 SNRPD1P62314 119 aaKnown RBP20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 EIF3IQ13347 325 aaKnown RBP20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 MYLK3Q32MK0 819 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 ARCQ7LC44 396 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 TTC7BQ86TV6 843 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 VPS36Q86VN1 386 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 FAM131BQ86XD5 332 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 IRF2BP1Q8IU81 584 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 EXD3Q8N9H8 876 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 OR2AP1Q8NGE2 309 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 ARHGEF2Q92974 986 aaKnown RBP20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 KLHL32Q96NJ5 620 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 OSBPL1AQ9BXW6 950 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 RETREG1Q9H6L5 497 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 NDFIP2Q9NV92 336 aa20.24■□□□□ 0.83
LPCAT3-211ENST00000543794 KRIT1O00522 736 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 PLD2O14939 933 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 ARHGAP6O43182 974 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 TM7SF2O76062 418 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 UGT2B4P06133 528 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 EIF4A3P38919 411 aaKnown RBP20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 GEMIN4P57678 1058 aaKnown RBP20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 PPARDQ03181 441 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 POLD3Q15054 466 aaPredicted RBP20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 LVRNQ6Q4G3 990 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 XKR5Q6UX68 686 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 MACC1Q6ZN28 852 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 FBXO39Q8N4B4 442 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 CFAP57Q96MR6 1250 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 PDCL3Q9H2J4 239 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 MBNL1Q9NR56 388 aaKnown RBP20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 ACSL6Q9UKU0 697 aa20.23■□□□□ 0.83
LPCAT3-211ENST00000543794 NAV2Q8IVL1 2488 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms