RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 PRCCQ92733 491 aaPredicted RBP11.69□□□□□ -0.54
COPS7A-217ENST00000543537 DUSP15Q9H1R2 295 aaPredicted RBP11.69□□□□□ -0.54
COPS7A-217ENST00000543537 NEUROG2Q9H2A3 272 aa11.69□□□□□ -0.54
COPS7A-217ENST00000543537 CDC42EP4Q9H3Q1 356 aaKnown RBP11.69□□□□□ -0.54
COPS7A-217ENST00000543537 ETNK2Q9NVF9 386 aa11.69□□□□□ -0.54
COPS7A-217ENST00000543537 COX16Q9P0S2 106 aa11.69□□□□□ -0.54
COPS7A-217ENST00000543537 SPTBN2O15020 2390 aa11.69□□□□□ -0.54
COPS7A-217ENST00000543537 CNOT1A5YKK6 2376 aaKnown RBP11.68□□□□□ -0.54
COPS7A-217ENST00000543537 IGLV3-10A0A075B6K4 115 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 CXorf51AA0A1B0GTR3 108 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 TYW5A2RUC4 315 aaKnown RBP11.68□□□□□ -0.54
COPS7A-217ENST00000543537 DRGXA6NNA5 263 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 NEBLO76041 1014 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 PENKP01210 267 aaPredicted RBP11.68□□□□□ -0.54
COPS7A-217ENST00000543537 IGLV3-27P01718 113 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 KLKB1P03952 638 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 HNRNPLP14866 589 aaKnown RBP eCLIP11.68□□□□□ -0.54
COPS7A-217ENST00000543537 STX2P32856 288 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 CHKAP35790 457 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 MMP13P45452 471 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 LIMK1P53667 647 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 ZNF844Q08AG5 666 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 AP1B1Q10567 949 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 NAB1Q13506 487 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 LAMB3Q13751 1172 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 KCNJ11Q14654 390 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 UAP1Q16222 522 aaPredicted RBP11.68□□□□□ -0.54
COPS7A-217ENST00000543537 PARP15Q460N3 678 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 C5orf22Q49AR2 442 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 TEX44Q53QW1 395 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 ANKRD20A2Q5SQ80 823 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 ANKRD20A1Q5TYW2 823 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 MANEALQ5VSG8 457 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 ANKRD20A3Q5VUR7 823 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 RWDD4Q6NW29 188 aaKnown RBP11.68□□□□□ -0.54
COPS7A-217ENST00000543537 TMEM92Q6UXU6 159 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 ZNF783Q6ZMS7 281 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 DGLUCYQ7Z3D6 616 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 CPXM2Q8N436 756 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 P2RY11Q96G91 374 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 XPO6Q96QU8 1125 aaKnown RBP11.68□□□□□ -0.54
COPS7A-217ENST00000543537 CYTH2Q99418 400 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 RTKNQ9BST9 563 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 CD248Q9HCU0 757 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 SAYSD1Q9NPB0 183 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 TMEM248Q9NWD8 314 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 VPS18Q9P253 973 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 SAE1Q9UBE0 346 aaPredicted RBP11.68□□□□□ -0.54
COPS7A-217ENST00000543537 STOML2Q9UJZ1 356 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 ADAM21Q9UKJ8 722 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 HCN2Q9UL51 889 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 SLC27A6Q9Y2P4 619 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 IKBKGQ9Y6K9 419 aa11.68□□□□□ -0.54
COPS7A-217ENST00000543537 TBC1D3BA6NDS4 549 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 ANTXRLA6NF34 631 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 E9PAM4 449 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 GFRA2O00451 464 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 SLC30A4O14863 429 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 MATN3O15232 486 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 TP73O15350 636 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 ALDH1A2O94788 518 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 RHOBTB1O94844 696 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 CISD3P0C7P0 127 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 IRF1P10914 325 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 TYRP14679 529 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 NPY2RP49146 381 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 SLC18A1P54219 525 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 ATXN1P54253 815 aaKnown RBP11.67□□□□□ -0.54
COPS7A-217ENST00000543537 SEC13P55735 322 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 IFI35P80217 286 aaPredicted RBP11.67□□□□□ -0.54
COPS7A-217ENST00000543537 CBX1P83916 185 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 SKOR1P84550 965 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 EFEMP1Q12805 493 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 PDIA2Q13087 525 aaKnown RBP11.67□□□□□ -0.54
COPS7A-217ENST00000543537 HNRNPDQ14103 355 aaKnown RBP11.67□□□□□ -0.54
COPS7A-217ENST00000543537 USP39Q53GS9 565 aaKnown RBP11.67□□□□□ -0.54
COPS7A-217ENST00000543537 NAPEPLDQ6IQ20 393 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 LRRC8BQ6P9F7 803 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 KDM7AQ6ZMT4 941 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 PID1Q7Z2X4 250 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 CCDC117Q8IWD4 279 aaPredicted RBP11.67□□□□□ -0.54
COPS7A-217ENST00000543537 ATPAF2Q8N5M1 289 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 TXNDC5Q8NBS9 432 aaKnown RBP11.67□□□□□ -0.54
COPS7A-217ENST00000543537 MDGA1Q8NFP4 955 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 ZNF599Q96NL3 588 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 BBS2Q9BXC9 721 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 CALCOCO1Q9P1Z2 691 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 NUDT5Q9UKK9 219 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 CDV3Q9UKY7 258 aaKnown RBP11.67□□□□□ -0.54
COPS7A-217ENST00000543537 RALGAPA1Q6GYQ0 2036 aa11.67□□□□□ -0.54
COPS7A-217ENST00000543537 ABCA7Q8IZY2 2146 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 SLC12A8A0AV02 714 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 SDR42E2A6NKP2 422 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 NEDD8-MDP1E9PL57 170 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 F5H5T6 163 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 RNF103O00237 685 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 NPC1O15118 1278 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 CLDN11O75508 207 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 SUN1O94901 812 aa11.66□□□□□ -0.54
COPS7A-217ENST00000543537 KLF8O95600 359 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms