RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 CAAP1Q9H8G2 361 aa17.68■□□□□ 0.42
PPP1CA-210ENST00000542876 POLR1BQ9H9Y6 1135 aa17.68■□□□□ 0.42
PPP1CA-210ENST00000542876 NDFIP2Q9NV92 336 aa17.68■□□□□ 0.42
PPP1CA-210ENST00000542876 TAB2Q9NYJ8 693 aa17.68■□□□□ 0.42
PPP1CA-210ENST00000542876 SPASTQ9UBP0 616 aa17.68■□□□□ 0.42
PPP1CA-210ENST00000542876 SALL4Q9UJQ4 1053 aa17.68■□□□□ 0.42
PPP1CA-210ENST00000542876 NOCTQ9UK39 431 aaKnown RBP17.68■□□□□ 0.42
PPP1CA-210ENST00000542876 LY6G6EA0A0G2JKS1 128 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 C2CD4BA6NLJ0 364 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 TPP1O14773 563 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 BUB1O43683 1085 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 DXOO77932 396 aaKnown RBP17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 LRIG2O94898 1065 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 PRB1P04280 392 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 PLEKP08567 350 aaPredicted RBP17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 KRT3P12035 628 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 PTPN9P43378 593 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 UCNP55089 124 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 ERVPABLB-1P60509 514 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 POLR2FP61218 127 aaKnown RBP17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 NR0B2Q15466 257 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 FKBP15Q5T1M5 1219 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 GDPD4Q6W3E5 623 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 LEKR1Q6ZMV7 388 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 EFL1Q7Z2Z2 1120 aaKnown RBP17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 SLC30A5Q8TAD4 765 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 GPT2Q8TD30 523 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 CXorf40AQ8TE69 158 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 GRAMD1AQ96CP6 724 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 GDAP1L1Q96MZ0 367 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 KLHL32Q96NJ5 620 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 THSD1Q9NS62 852 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 CHMP5Q9NZZ3 219 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 ITM2BQ9Y287 266 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 U3KQA8 63 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 PTPRQQ9UMZ3 2332 aa17.67■□□□□ 0.42
PPP1CA-210ENST00000542876 TRPM6Q9BX84 2022 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 FAM72CH0Y354 149 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 KDELR3O43731 214 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 RBMS1P29558 406 aaKnown RBP17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 SOX5P35711 763 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 NSFP46459 744 aaKnown RBP17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 TMPRSS3P57727 454 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 PFN3P60673 137 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 FMO1Q01740 532 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 ISXQ2M1V0 245 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 RAB6CQ53S08 254 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 FAM72AQ5TYM5 149 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 FAM72DQ6L9T8 149 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 GUSBP11Q6P575 273 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 FAM72BQ86X60 149 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 FAM172AQ8WUF8 416 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 KCNE4Q8WWG9 221 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 CASKIN2Q8WXE0 1202 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 HIC2Q96JB3 615 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 SELENOOQ9BVL4 669 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 SLC13A1Q9BZW2 595 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 RAB6CQ9H0N0 254 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 VPS16Q9H269 839 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 FAM207AQ9NSI2 230 aaPredicted RBP17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 APOBEC3BQ9UH17 382 aaKnown RBP17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 KLF15Q9UIH9 416 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 GGT7Q9UJ14 662 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 DAAM1Q9Y4D1 1078 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 MYLKQ15746 1914 aa17.66■□□□□ 0.42
PPP1CA-210ENST00000542876 GCN1Q92616 2671 aaKnown RBP17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 SPINT1O43278 529 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 TM7SF2O76062 418 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 TMCC1O94876 653 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 IGSF6O95976 241 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 TGM2P21980 687 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 XPAP23025 273 aaPredicted RBP17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 STAT1P42224 750 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 RHOAP61586 193 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 YPEL5P62699 121 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 EIF2B5Q13144 721 aaKnown RBP17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 SYCP1Q15431 976 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 PRRT3Q5FWE3 981 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 ATXN7L2Q5T6C5 722 aaPredicted RBP17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 SLFN11Q7Z7L1 901 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 VPS36Q86VN1 386 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 CCDC185Q8N715 623 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 JOSD2Q8TAC2 188 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 NTAN1Q96AB6 310 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 CENPTQ96BT3 561 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 GANQ9H2C0 597 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 NLRC4Q9NPP4 1024 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 ADAM22Q9P0K1 906 aa17.65■□□□□ 0.42
PPP1CA-210ENST00000542876 EME2A4GXA9 379 aaPredicted RBP17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 ANKRD62A6NC57 917 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 TOR1BO14657 336 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 AREL1O15033 823 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 MUSKO15146 869 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 MMP20O60882 483 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 GJB6O95452 261 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 CALB1P05937 261 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 ANXA6P08133 673 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 CHRNB2P17787 502 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 GPD1P21695 349 aa17.64■□□□□ 0.41
PPP1CA-210ENST00000542876 EPHB2P29323 1055 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms