RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 NDFIP2Q9NV92 336 aa12.05□□□□□ -0.48
PTPN6-219ENST00000542848 TMEM248Q9NWD8 314 aa12.05□□□□□ -0.48
PTPN6-219ENST00000542848 NOCTQ9UK39 431 aaKnown RBP12.05□□□□□ -0.48
PTPN6-219ENST00000542848 ACTL7AQ9Y615 435 aa12.05□□□□□ -0.48
PTPN6-219ENST00000542848 SETXQ7Z333 2677 aaKnown RBP12.04□□□□□ -0.48
PTPN6-219ENST00000542848 FAM170AA1A519 330 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 NEMP1O14524 444 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 TOR1BO14657 336 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 KDELR3O43731 214 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 MYF5P13349 255 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 JUNDP17535 347 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 SDC4P31431 198 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 PTPN9P43378 593 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 PFN3P60673 137 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 GABREP78334 506 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 PTK2BQ14289 1009 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 GSE1Q14687 1217 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 C15orf59Q2T9L4 293 aaPredicted RBP12.04□□□□□ -0.48
PTPN6-219ENST00000542848 MYLK3Q32MK0 819 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 TCP11X2Q5H9J9 407 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 RWDD4Q6NW29 188 aaKnown RBP12.04□□□□□ -0.48
PTPN6-219ENST00000542848 OR2AP1Q8NGE2 309 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 TPCN2Q8NHX9 752 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 RXFP2Q8WXD0 754 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 CENPIQ92674 756 aaPredicted RBP12.04□□□□□ -0.48
PTPN6-219ENST00000542848 VOPP1Q96AW1 172 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 CENPTQ96BT3 561 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 LGMNQ99538 433 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 POLR1BQ9H9Y6 1135 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 SAMSN1Q9NSI8 373 aaKnown RBP12.04□□□□□ -0.48
PTPN6-219ENST00000542848 TMEM63CQ9P1W3 806 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 DNAI1Q9UI46 699 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 KLF15Q9UIH9 416 aa12.04□□□□□ -0.48
PTPN6-219ENST00000542848 EME2A4GXA9 379 aaPredicted RBP12.03□□□□□ -0.48
PTPN6-219ENST00000542848 ZSCAN5CA6NGD5 496 aaPredicted RBP12.03□□□□□ -0.48
PTPN6-219ENST00000542848 C2CD4BA6NLJ0 364 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 FAM72CH0Y354 149 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 KRIT1O00522 736 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 AREL1O15033 823 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 SPINT1O43278 529 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 RAMP2O60895 175 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 LRIG2O94898 1065 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 PRB1P04280 392 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 MPOP05164 745 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 PLEKP08567 350 aaPredicted RBP12.03□□□□□ -0.48
PTPN6-219ENST00000542848 CHRNB2P17787 502 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 TGM2P21980 687 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 GKP32189 559 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 ABL2P42684 1182 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 UCNP55089 124 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 YPEL5P62699 121 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 CXADRP78310 365 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 FMO1Q01740 532 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 RAD51Q06609 339 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 EIF2B5Q13144 721 aaKnown RBP12.03□□□□□ -0.48
PTPN6-219ENST00000542848 CDKN3Q16667 212 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 CDO1Q16878 200 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 ISXQ2M1V0 245 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 RAB6CQ53S08 254 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 FAM72AQ5TYM5 149 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 BROXQ5VW32 411 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 FAM72DQ6L9T8 149 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 IGF2-ASQ6U949 168 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 GDPD4Q6W3E5 623 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 TRIM72Q6ZMU5 477 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 FAM72BQ86X60 149 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 LMX1AQ8TE12 382 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 SLC20A1Q8WUM9 679 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 CASKIN2Q8WXE0 1202 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 GLMNQ92990 594 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 TBC1D31Q96DN5 1066 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 TBATAQ96M53 351 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 KLHL32Q96NJ5 620 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 IL12RB2Q99665 862 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 DPH1Q9BZG8 443 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 RAB6CQ9H0N0 254 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 SPASTQ9UBP0 616 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 GGT7Q9UJ14 662 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 DAAM1Q9Y4D1 1078 aa12.03□□□□□ -0.48
PTPN6-219ENST00000542848 CPED1A4D0V7 1026 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 TCEA3O75764 348 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 C1QL1O75973 258 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 GFPT2O94808 682 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 UGT2B4P06133 528 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 KRT3P12035 628 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 UNGP13051 313 aaPredicted RBP12.02□□□□□ -0.49
PTPN6-219ENST00000542848 RPIAP49247 311 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 THOP1P52888 689 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 JAM2P57087 298 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 TMPRSS3P57727 454 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 NR0B2Q15466 257 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 DEFB133Q30KQ1 61 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 INO80DQ53TQ3 878 aaPredicted RBP12.02□□□□□ -0.49
PTPN6-219ENST00000542848 TPRG1LQ5T0D9 272 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 EFL1Q7Z2Z2 1120 aaKnown RBP12.02□□□□□ -0.49
PTPN6-219ENST00000542848 TTC7BQ86TV6 843 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 OR6K2Q8NGY2 324 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 JOSD2Q8TAC2 188 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 SLC30A5Q8TAD4 765 aa12.02□□□□□ -0.49
PTPN6-219ENST00000542848 WDR48Q8TAF3 677 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms