RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 PGM1P36871 562 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 KCNJ4P48050 445 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 PPATQ06203 517 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 NAA25Q14CX7 972 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 FAM133BQ5BKY9 247 aaKnown RBP3.44□□□□□ -1.86
USP28-210ENST00000542033 SH2D4BQ5SQS7 431 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 SLC9C2Q5TAH2 1124 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 NUGGCQ68CJ6 796 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 HAUS3Q68CZ6 603 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 GJB7Q6PEY0 223 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 PARM1Q6UWI2 310 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 LRRC8DQ7L1W4 858 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 TECPR1Q7Z6L1 1165 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 OR8H2Q8N162 312 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 DNAAF1Q8NEP3 725 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 NOC3LQ8WTT2 800 aaKnown RBP3.44□□□□□ -1.86
USP28-210ENST00000542033 HDAC7Q8WUI4 952 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 RNF125Q96EQ8 232 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 RSRC1Q96IZ7 334 aaKnown RBP3.44□□□□□ -1.86
USP28-210ENST00000542033 VCPIP1Q96JH7 1222 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 ZNF333Q96JL9 665 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 MYCBPQ99417 103 aaPredicted RBP3.44□□□□□ -1.86
USP28-210ENST00000542033 B3GNT4Q9C0J1 378 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 FAM234AQ9H0X4 552 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 MROH8Q9H579 483 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 ZBTB40Q9NUA8 1239 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 FBXO40Q9UH90 709 aa3.44□□□□□ -1.86
USP28-210ENST00000542033 TARSL2A2RTX5 802 aaKnown RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 C17orf102A2RUQ5 167 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 PI4KAP2A4QPH2 592 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 SH2D7A6NKC9 451 aaPredicted RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 C17orf100A8MU93 164 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 CCER2I3L3R5 266 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 GUCY1B2O75343 617 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 SCGB1D1O95968 90 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 UNGP13051 313 aaPredicted RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 RFC1P35251 1148 aaPredicted RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 PEX19P40855 299 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 RAD52P43351 418 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 DRG2P55039 364 aaKnown RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 TMPRSS3P57727 454 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 ARF3P61204 181 aaPredicted RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 ARF1P84077 181 aaKnown RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 GPR68Q15743 365 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 CCNG2Q16589 344 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 MEA1Q16626 185 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 TSTQ16762 297 aaKnown RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 SYTL3Q4VX76 610 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 HSP90B2PQ58FF3 399 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 Q5PR19 223 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 DAB2IPQ5VWQ8 1189 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 SLC16A12Q6ZSM3 486 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 TMTC3Q6ZXV5 915 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 GPSM1Q86YR5 675 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 HORMAD2Q8N7B1 307 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 SETD9Q8NE22 299 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 TBC1D22AQ8WUA7 517 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 HSPH1Q92598 858 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 CNOT9Q92600 299 aaKnown RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 SDF4Q9BRK5 362 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 LMAN2LQ9H0V9 348 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 ISCUQ9H1K1 167 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 CCDC68Q9H2F9 335 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 TAOK3Q9H2K8 898 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 MAP6D1Q9H9H5 199 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 RRAGDQ9NQL2 400 aaPredicted RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 ENTPD7Q9NQZ7 604 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 KRT84Q9NSB2 600 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 GRHL1Q9NZI5 618 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 PLEKHB1Q9UF11 243 aaPredicted RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 CNOT7Q9UIV1 285 aaKnown RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 ZHX1Q9UKY1 873 aaPredicted RBP3.43□□□□□ -1.86
USP28-210ENST00000542033 GPR34Q9UPC5 381 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 CNPY2Q9Y2B0 182 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 KNSTRNQ9Y448 316 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 MST1RQ04912 1400 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 RAD50Q92878 1312 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 KIF16BQ96L93 1317 aa3.43□□□□□ -1.86
USP28-210ENST00000542033 A0A0A0MQY5 61 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 RPS10-NUDT3A0A1W2PQS6 291 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 DDTLA6NHG4 134 aaPredicted RBP3.42□□□□□ -1.86
USP28-210ENST00000542033 PROB1E7EW31 1015 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 STMND1H3BQB6 276 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 CTAGE5O15320 804 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 INSIG1O15503 277 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 TIPRLO75663 272 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 SERPINC1P01008 464 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 CHRM4P08173 479 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 MMP3P08254 477 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 MYZAPP0CAP1 466 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 ZNF853P0CG23 659 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 HSPA1AP0DMV8 641 aaKnown RBP3.42□□□□□ -1.86
USP28-210ENST00000542033 HSPA1BP0DMV9 641 aaKnown RBP3.42□□□□□ -1.86
USP28-210ENST00000542033 SNHG28P0DPA3 235 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 ALOX12P18054 663 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 TNFRSF1BP20333 461 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 CD72P21854 359 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 ABCD3P28288 659 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 CDC25AP30304 524 aa3.42□□□□□ -1.86
USP28-210ENST00000542033 DPP6P42658 865 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms