RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 OSBPL11Q9BXB4 747 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 FTHL17Q9BXU8 183 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 COQ10BQ9H8M1 238 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 CDHR5Q9HBB8 845 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 MRM3Q9HC36 420 aaKnown RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 UBP1Q9NZI7 540 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 NCKIPSDQ9NZQ3 722 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 AAR2Q9Y312 384 aaKnown RBP9.78□□□□□ -0.84
CDH13-204ENST00000539548 AK5Q9Y6K8 562 aa9.78□□□□□ -0.84
CDH13-204ENST00000539548 MYOCOSA0A1B0GUC4 107 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 TCRBV3S1A0A5B6 114 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 YJEFN3A6XGL0 299 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 TMEM233B4DJY2 109 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 E7ENX8 843 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 TRMUO75648 421 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 F9P00740 461 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 CDK4P11802 303 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 ZNF23P17027 643 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 CDH2P19022 906 aaPredicted RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 TCN1P20061 433 aaPredicted RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 ATP5F1P24539 256 aaPredicted RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 SLC5A2P31639 672 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 ALDH3B2P48448 385 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 KPNA2P52292 529 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 ATXN3P54252 364 aaPredicted RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 COG7P83436 770 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 PDAP1Q13442 181 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 SQLEQ14534 574 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 PSMD5Q16401 504 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 CNSTQ6PJW8 725 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 DLK2Q6UY11 383 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 TRIM67Q6ZTA4 783 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 OTOP3Q7RTS5 596 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 AMIGO2Q86SJ2 522 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 CCDC117Q8IWD4 279 aaPredicted RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 MFSD6LQ8IWD5 586 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 PCDH20Q8N6Y1 951 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 TXNDC5Q8NBS9 432 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 RIN3Q8TB24 985 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 OMDQ99983 421 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 ULBP1Q9BZM6 244 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 PREBQ9HCU5 417 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 DDX18Q9NVP1 670 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 RRN3Q9NYV6 651 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 KLK14Q9P0G3 267 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 IPO11Q9UI26 975 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 KCNH4Q9UQ05 1017 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 HEATR9A2RTY3 570 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 RRN3P2A6NIE6 340 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 FBP2O00757 339 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 HNRNPRO43390 633 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 TRPA1O75762 1119 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 H6PDO95479 791 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 FAM200BP0CF97 657 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 AXLP30530 894 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 SLC7A1P30825 629 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 ARCN1P48444 511 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 CXCR3P49682 368 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 MAP3K7CLP57077 242 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 MPP1Q00013 466 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 SULT2A1Q06520 285 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 SOX4Q06945 474 aaPredicted RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 TMEM62Q0P6H9 643 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 CTBP1Q13363 440 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 ZNF792Q3KQV3 632 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 IRAK1BP1Q5VVH5 260 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 CARM1Q86X55 608 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 DENND6AQ8IWF6 608 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 HMGCLL1Q8TB92 370 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 PTCD2Q8WV60 388 aaKnown RBP9.77□□□□□ -0.85
CDH13-204ENST00000539548 HEXDCQ8WVB3 486 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 LRTOMTQ8WZ04 291 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 LPGAT1Q92604 370 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 SLCO4A1Q96BD0 722 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 MAML3Q96JK9 1138 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 TBL1YQ9BQ87 522 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 MED10Q9BTT4 135 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 COLEC11Q9BWP8 271 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 MEAF6Q9HAF1 191 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 CACNA2D2Q9NY47 1150 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 OR12D3Q9UGF7 316 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 CD300AQ9UGN4 299 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 GINS2Q9Y248 185 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 GMEB1Q9Y692 573 aa9.77□□□□□ -0.85
CDH13-204ENST00000539548 ARHGEF37A1IGU5 675 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 CCDC78A2IDD5 438 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 H3BNH8 94 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 PSMD12O00232 456 aaPredicted RBP9.76□□□□□ -0.85
CDH13-204ENST00000539548 GABRDO14764 452 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 UBDO15205 165 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 HOXD8P13378 290 aaPredicted RBP9.76□□□□□ -0.85
CDH13-204ENST00000539548 DARSP14868 501 aaKnown RBP9.76□□□□□ -0.85
CDH13-204ENST00000539548 CCNCP24863 283 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 PCSK6P29122 969 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 ADCYAP1R1P41586 468 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 IREB2P48200 963 aaKnown RBP9.76□□□□□ -0.85
CDH13-204ENST00000539548 TAS2R39P59534 338 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 POU4F1Q01851 419 aa9.76□□□□□ -0.85
CDH13-204ENST00000539548 PPIL2Q13356 520 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms