RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 SLC30A9Q6PML9 568 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 Q6ZNB5 142 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 PDCD7Q8N8D1 485 aaKnown RBP8.98□□□□□ -0.97
DDB1-213ENST00000539332 ITFG1Q8TB96 612 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 ING5Q8WYH8 240 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 LRCH3Q96II8 777 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 PRICKLE1Q96MT3 831 aaPredicted RBP8.98□□□□□ -0.97
DDB1-213ENST00000539332 FAM161BQ96MY7 647 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 RPRD1AQ96P16 312 aaPredicted RBP8.98□□□□□ -0.97
DDB1-213ENST00000539332 PPP1R2P1Q96PQ5 205 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 TMEM237Q96Q45 408 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 FCRL5Q96RD9 977 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 SMG9Q9H0W8 520 aaKnown RBP8.98□□□□□ -0.97
DDB1-213ENST00000539332 VPS37BQ9H9H4 285 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 GLOD4Q9HC38 313 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 CASS4Q9NQ75 786 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 ABCF3Q9NUQ8 709 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 CLEC1BQ9P126 229 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 KLHL14Q9P2G3 628 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 IPO11Q9UI26 975 aaKnown RBP8.98□□□□□ -0.97
DDB1-213ENST00000539332 ZMYM5Q9UJ78 669 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 CDH22Q9UJ99 828 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 ARHGAP26Q9UNA1 814 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 L3MBTL1Q9Y468 752 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 LRRC42Q9Y546 428 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 ACTL7BQ9Y614 415 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 DENND4AQ7Z401 1863 aa8.98□□□□□ -0.97
DDB1-213ENST00000539332 TCRBV9S1A1TA0A576 114 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 TRDMT1O14717 391 aaKnown RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 PSMD3O43242 534 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 TBX10O75333 385 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 JCHAINP01591 159 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 IGFBP4P22692 258 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 STX2P32856 288 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 RASSF2P50749 326 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 KCNJ2P63252 427 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 ROR2Q01974 943 aaKnown RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 DLX2Q07687 328 aaPredicted RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 SERINC3Q13530 473 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 FRG1Q14331 258 aaKnown RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 CBX2Q14781 532 aaPredicted RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 COL19A1Q14993 1142 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 SETDB1Q15047 1291 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 ZRSR2Q15696 482 aaKnown RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 PLEKHG6Q3KR16 790 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 WASHC2DQ5SRD0 308 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 HP1BP3Q5SSJ5 553 aaPredicted RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 ADGRF1Q5T601 910 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 TTC39BQ5VTQ0 682 aaPredicted RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 ADGRD1Q6QNK2 874 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 POTEHQ6S545 545 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 C3orf62Q6ZUJ4 267 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 CHST9Q7L1S5 443 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 TFAP2DQ7Z6R9 452 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 EXOC3L1Q86VI1 746 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 CCNJLQ8IV13 435 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 LGI2Q8N0V4 545 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 INPP5DQ92835 1189 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 HMCESQ96FZ2 354 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 OXNAD1Q96HP4 312 aaPredicted RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 ZSWIM3Q96MP5 696 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 NAT9Q9BTE0 207 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 OSBPL1AQ9BXW6 950 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 VCXQ9H320 206 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 PSMC3IPQ9P2W1 217 aaPredicted RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 AGO1Q9UL18 857 aaKnown RBP8.97□□□□□ -0.97
DDB1-213ENST00000539332 CCL26Q9Y258 94 aa8.97□□□□□ -0.97
DDB1-213ENST00000539332 SMIM23A6NLE4 172 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 SCAMP3O14828 347 aaKnown RBP8.96□□□□□ -0.97
DDB1-213ENST00000539332 RAMP2O60895 175 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 FAM155BO75949 473 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 ALDH1A2O94788 518 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 UNC5CO95185 931 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 PRAMEF12O95522 483 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 HLA-DQB2P05538 268 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 FSHRP23945 695 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 HOXD9P28356 352 aaPredicted RBP8.96□□□□□ -0.97
DDB1-213ENST00000539332 LTBRP36941 435 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 CDH4P55283 916 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 GEMIN4P57678 1058 aaKnown RBP8.96□□□□□ -0.97
DDB1-213ENST00000539332 IL10RBQ08334 325 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 NR1H3Q13133 447 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 RABGAP1LQ5R372 815 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 ARMC3Q5W041 872 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 ZNF449Q6P9G9 518 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 RFWD3Q6PCD5 774 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 UNC5AQ6ZN44 842 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 TRABD2AQ86V40 505 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 CCDC117Q8IWD4 279 aaPredicted RBP8.96□□□□□ -0.97
DDB1-213ENST00000539332 NPAS3Q8IXF0 933 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 PALM2Q8IXS6 379 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 CYP4X1Q8N118 509 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 TTC16Q8NEE8 873 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 MZB1Q8WU39 189 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 DCAKDQ8WVC6 231 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 SLC44A1Q8WWI5 657 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 CKAP2Q8WWK9 683 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 USP13Q92995 863 aaPredicted RBP8.96□□□□□ -0.97
DDB1-213ENST00000539332 TADA1Q96BN2 335 aa8.96□□□□□ -0.97
DDB1-213ENST00000539332 FAM210AQ96ND0 272 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms