RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 PARP15Q460N3 678 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 DNAL1Q4LDG9 190 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 KHDC1Q4VXA5 237 aaKnown RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 TSTD2Q5T7W7 516 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 LIPMQ5VYY2 423 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 CEP97Q8IW35 865 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 SLC25A41Q8N5S1 370 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 ZNF781Q8N8C0 355 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 ARRDC2Q8TBH0 407 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 C2orf15Q8WU43 125 aaKnown RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 NSMCE1Q8WV22 266 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 KCTD4Q8WVF5 259 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 PSMG2Q969U7 264 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 SEPT5Q99719 369 aaPredicted RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 SEZ6LQ9BYH1 1024 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 TK2O00142 265 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 RAMP2O60895 175 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 TRPA1O75762 1119 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 GALTP07902 379 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 MAPKAPK2P49137 400 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 KPNA1P52294 538 aaPredicted RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 TAS2R39P59534 338 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 POU4F1Q01851 419 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 DSC2Q02487 901 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 USP4Q13107 963 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 SERINC3Q13530 473 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 SEPT6Q14141 434 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 KPNB1Q14974 876 aaKnown RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 POLD3Q15054 466 aaPredicted RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 ACSBG2Q5FVE4 666 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 RTP2Q5QGT7 225 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 VWA5B1Q5TIE3 1220 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 SNX30Q5VWJ9 437 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 ZNF470Q6ECI4 717 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 FSTL5Q8N475 847 aaPredicted RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 CALML6Q8TD86 181 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 SEPT8Q92599 483 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 PABPC5Q96DU9 382 aaKnown RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 ANKRD27Q96NW4 1050 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 RPRD1AQ96P16 312 aaPredicted RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 TMEM175Q9BSA9 504 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 DRC3Q9H069 523 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 ILKAPQ9H0C8 392 aaPredicted RBP11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 COG4Q9H9E3 785 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 LRFN2Q9ULH4 789 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 RAP2CQ9Y3L5 183 aa11.54□□□□□ -0.56
SLC28A1-204ENST00000538177 LOC285095A0A1B0GVY8 99 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 HOXA2O43364 376 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 TM7SF2O76062 418 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 HMBSP08397 361 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 CPOXP36551 454 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 AVPR1AP37288 418 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 HK2P52789 917 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 PGGT1BP53609 377 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 MAXP61244 160 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 ITKQ08881 620 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 DUSP4Q13115 394 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 TSNAXIP1Q2TAA8 658 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 METTL21CQ5VZV1 264 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 NADSYN1Q6IA69 706 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 LRRC8EQ6NSJ5 796 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 ANKS3Q6ZW76 656 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 GALNT7Q86SF2 657 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 NPAS4Q8IUM7 802 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 FAM126BQ8IXS8 530 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 PGBD5Q8N414 524 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 TDRD5Q8NAT2 981 aaKnown RBP11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 GABPB2Q8TAK5 448 aaPredicted RBP11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 WDR60Q8WVS4 1066 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 NXNL1Q96CM4 212 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 SCYL1Q96KG9 808 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 TTLL2Q9BWV7 592 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 CREBZFQ9NS37 354 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 HCSTQ9UBK5 93 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 HTTP42858 3142 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 MYLKQ15746 1914 aa11.53□□□□□ -0.56
SLC28A1-204ENST00000538177 A0A087X1B8 175 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 MROH6A6NGR9 719 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 VGLL3A8MV65 326 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 TLR5O60602 858 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 GCKP35557 465 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 PBX3P40426 434 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 GRIA4P48058 902 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 LEPRP48357 1165 aaKnown RBP11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 NUMBP49757 651 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 DLG1Q12959 904 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 TCTN1Q2MV58 587 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 DEFB115Q30KQ5 88 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 C5orf22Q49AR2 442 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 TAS1R1Q7RTX1 841 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 SCUBE1Q8IWY4 988 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 SLAIN1Q8ND83 568 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 STON2Q8WXE9 905 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 MYEOVQ96EZ4 313 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 ELMO2Q96JJ3 720 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 OMDQ99983 421 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 TTPALQ9BTX7 342 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 MRPL9Q9BYD2 267 aaKnown RBP11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 CCSER2Q9H7U1 834 aa11.52□□□□□ -0.56
SLC28A1-204ENST00000538177 LRRC42Q9Y546 428 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms