RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 MCPH1Q8NEM0 835 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 DEPDC1BQ8WUY9 529 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 SLC7A3Q8WY07 619 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 PBXIP1Q96AQ6 731 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 PPWD1Q96BP3 646 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 TMA16Q96EY4 203 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 EGLN2Q96KS0 407 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 MCEEQ96PE7 176 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 NIFKQ9BYG3 293 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 ZNF385DQ9H6B1 395 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 ADA2Q9NZK5 511 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 FAM172BPA6NC97 362 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 APOC4-APOC2K7ER74 178 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 SCO2O43819 266 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 HSPA4LO95757 839 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 APOC2P02655 101 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 UBL4AP11441 157 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 SMPD1P17405 629 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 MMP8P22894 467 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 NR4A2P43354 598 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 HLCSP50747 726 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 TNK2Q07912 1038 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 TARBP2Q15633 366 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 LDLRAP1Q5SW96 308 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 IQSEC1Q6DN90 963 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 TRMT10BQ6PF06 316 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 DCUN1D2Q6PH85 259 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 TAS2R42Q7RTR8 314 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 CAND1Q86VP6 1230 aaKnown RBP11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 AFG1LQ8WV93 481 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 TRAPPC12Q8WVT3 735 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 C17orf80Q9BSJ5 609 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 PCDH12Q9NPG4 1184 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 KMT5AQ9NQR1 393 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 ZSWIM8A7E2V4 1837 aa11.48□□□□□ -0.57
SEMA4D-221ENST00000537934 TCRBV5S1A1TA0A578 114 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 IL18RAPO95256 599 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ALDOAP04075 364 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ZNF286BP0CG31 522 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 MYCLP1P12525 358 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 MX2P20592 715 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 KDELR1P24390 212 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 TM4SF4P48230 202 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 RAD23AP54725 363 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 TUBA1BP68363 451 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ZNF394Q53GI3 561 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 UGT3A1Q6NUS8 523 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 RNF19BQ6ZMZ0 732 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 TUBA1AQ71U36 451 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 USP37Q86T82 979 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 PARP8Q8N3A8 854 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 CLIP4Q8N3C7 705 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 TDRD5Q8NAT2 981 aaKnown RBP11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 MFSD14AQ96MC6 490 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 CSF3RQ99062 836 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ARHGAP39Q9C0H5 1083 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 PCDHAC1Q9H158 963 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ABHD16BQ9H3Z7 469 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ZNF236Q9UL36 1845 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 GOLGA8QA0A0J9YX86 632 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 GOLGA8OA6NCC3 632 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ZBTB42B2RXF5 422 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 GOLGA8NF8WBI6 632 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 TPP1O14773 563 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 AREL1O15033 823 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 CRYZL1O95825 349 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 AMHP03971 560 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ABCB1P08183 1280 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 MBL2P11226 248 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 NCAM1P13591 858 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 GNA15P30679 374 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 SSTR3P32745 418 aaPredicted RBP11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ROR1Q01973 937 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 CDC20Q12834 499 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 LRIT3Q3SXY7 679 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 CCDC58Q4VC31 144 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 DNAJC24Q6P3W2 148 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 CBR4Q8N4T8 237 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 HCAR2Q8TDS4 363 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 SNX19Q92543 992 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 SEPT8Q92599 483 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 LPGAT1Q92604 370 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 NRBF2Q96F24 287 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 VMP1Q96GC9 406 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ST6GALNAC4Q9H4F1 302 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ATP13A3Q9H7F0 1226 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ZBTB26Q9HCK0 441 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 RAB6BQ9NRW1 208 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 NRBP2Q9NSY0 501 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 ARMC1Q9NVT9 282 aa11.47□□□□□ -0.57
SEMA4D-221ENST00000537934 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 TIPRLO75663 272 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 CALB1P05937 261 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 KRT7P08729 469 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 C7P10643 843 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 SERPINB1P30740 379 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 ETFBP38117 255 aa11.46□□□□□ -0.57
SEMA4D-221ENST00000537934 NKX2-5P52952 324 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms