RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 SPDYCQ5MJ68 293 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 KIAA0895LQ68EN5 471 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 GDPD4Q6W3E5 623 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 ERN2Q76MJ5 926 aaKnown RBP18.11■□□□□ 0.49
DDX55-204ENST00000536079 CYP2U1Q7Z449 544 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 CAMK1DQ8IU85 385 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 HAUS1Q96CS2 278 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 HDAC11Q96DB2 347 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 HES6Q96HZ4 224 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 HDAC8Q9BY41 377 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 GGT7Q9UJ14 662 aa18.11■□□□□ 0.49
DDX55-204ENST00000536079 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.11■□□□□ 0.49
DDX55-204ENST00000536079 TNRC6BQ9UPQ9 1833 aaKnown RBP18.11■□□□□ 0.49
DDX55-204ENST00000536079 LAMA1P25391 3075 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 EP300Q09472 2414 aaPredicted RBP18.1■□□□□ 0.49
DDX55-204ENST00000536079 C16orf96A6NNT2 1141 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 KCNK1O00180 336 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 MATN3O15232 486 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 KRT86O43790 486 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 PTMAP06454 111 aaKnown RBP18.1■□□□□ 0.49
DDX55-204ENST00000536079 HOXD11P31277 338 aaPredicted RBP18.1■□□□□ 0.49
DDX55-204ENST00000536079 MMP13P45452 471 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 CSNK1DP48730 415 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 SCNN1BP51168 640 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 RWDD2BP57060 319 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 PPIDQ08752 370 aaKnown RBP18.1■□□□□ 0.49
DDX55-204ENST00000536079 NSUN2Q08J23 767 aaKnown RBP eCLIP18.1■□□□□ 0.49
DDX55-204ENST00000536079 ZBTB17Q13105 803 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 PPP2R5EQ16537 467 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 ZNF805Q5CZA5 627 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 LRRC49Q8IUZ0 686 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 REXO1L1PQ8IX06 675 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 SYCE1Q8N0S2 351 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 CCNYQ8ND76 341 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 OR2T34Q8NGX1 318 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 C1orf216Q8TAB5 229 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 RBM41Q96IZ5 413 aaKnown RBP18.1■□□□□ 0.49
DDX55-204ENST00000536079 MGME1Q9BQP7 344 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 CPEB1Q9BZB8 566 aaKnown RBP18.1■□□□□ 0.49
DDX55-204ENST00000536079 C10orf88Q9H8K7 445 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 NOD2Q9HC29 1040 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 NT5MQ9NPB1 228 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 RXFP3Q9NSD7 469 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 SEMA4GQ9NTN9 838 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 EIF2B4Q9UI10 523 aaKnown RBP18.1■□□□□ 0.49
DDX55-204ENST00000536079 ITM2BQ9Y287 266 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.1■□□□□ 0.49
DDX55-204ENST00000536079 PCDHGA5Q9Y5G8 931 aa18.1■□□□□ 0.49
DDX55-204ENST00000536079 GON4LQ3T8J9 2241 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 MEI4A8MW99 385 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 WNT9AO14904 365 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 ADRB3P13945 408 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 TIMP2P16035 220 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 ZFXP17010 805 aaPredicted RBP18.09■□□□□ 0.49
DDX55-204ENST00000536079 MX2P20592 715 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 ZNF235Q14590 738 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 MARC1Q5VT66 337 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 PEAR1Q5VY43 1037 aaPredicted RBP18.09■□□□□ 0.49
DDX55-204ENST00000536079 SYT12Q8IV01 421 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 CCDC13Q8IYE1 715 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 CNTD1Q8N815 330 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 DNASE2BQ8WZ79 361 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 SNX19Q92543 992 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 LRIG1Q96JA1 1093 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 FAM118BQ9BPY3 351 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 CEP41Q9BYV8 373 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 OSBPL8Q9BZF1 889 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 RBM22Q9NW64 420 aaKnown RBP eCLIP18.09■□□□□ 0.493e-13■■■■■ 30.2
DDX55-204ENST00000536079 ZFR2Q9UPR6 939 aaKnown RBP18.09■□□□□ 0.49
DDX55-204ENST00000536079 FADS3Q9Y5Q0 445 aa18.09■□□□□ 0.49
DDX55-204ENST00000536079 RIF1Q5UIP0 2472 aaKnown RBP18.08■□□□□ 0.49
DDX55-204ENST00000536079 CEP192Q8TEP8 1941 aa18.08■□□□□ 0.49
DDX55-204ENST00000536079 TBC1D3DA0A087WVF3 549 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3IA0A087WXS9 549 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3EA0A087X179 549 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3KA0A087X1G2 549 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3FA6NER0 549 aaPredicted RBP18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3LB9A6J9 549 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TRAFD1O14545 582 aaPredicted RBP18.08■□□□□ 0.48
DDX55-204ENST00000536079 SLC7A4O43246 635 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 JCHAINP01591 159 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 PRKCGP05129 697 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 HLA-DQB2P05538 268 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3HP0C7X1 549 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 CCNB1P14635 433 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 MAT2AP31153 395 aaKnown RBP18.08■□□□□ 0.48
DDX55-204ENST00000536079 PTPN7P35236 360 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 NEK3P51956 506 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 COPS2P61201 443 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 SEMG2Q02383 582 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 DSC2Q02487 901 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 NIPAL4Q0D2K0 466 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 HNRNPDQ14103 355 aaKnown RBP18.08■□□□□ 0.48
DDX55-204ENST00000536079 TFDP2Q14188 446 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3GQ6DHY5 549 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3CQ6IPX1 549 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 BBS12Q6ZW61 710 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 KIAA2013Q8IYS2 634 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 RGL4Q8IZJ4 473 aa18.08■□□□□ 0.48
DDX55-204ENST00000536079 TBC1D3Q8IZP1 549 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms