RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 HOOK3Q86VS8 718 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 NDUFAF2Q8N183 169 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 EIF1ADQ8N9N8 165 aaKnown RBP16.44■□□□□ 0.22
VAMP1-205ENST00000535927 PJA1Q8NG27 643 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 OR2A12Q8NGT7 310 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 ARRDC2Q8TBH0 407 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 CCDC110Q8TBZ0 833 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 SORCS1Q8WY21 1168 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 SEC14L1Q92503 715 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 SEMA3CQ99985 751 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 DKK3Q9UBP4 350 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 NDRG2Q9UN36 371 aaKnown RBP16.44■□□□□ 0.22
VAMP1-205ENST00000535927 SIT1Q9Y3P8 196 aa16.44■□□□□ 0.22
VAMP1-205ENST00000535927 TTC34A8MYJ7 566 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 TTI1O43156 1089 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 RAD51CO43502 376 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 RNF40O75150 1001 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 EPHX1P07099 455 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 NFKB1P19838 968 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 TPSB2P20231 275 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 TARSP26639 723 aaKnown RBP16.43■□□□□ 0.22
VAMP1-205ENST00000535927 SERPINA4P29622 427 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 CLCN5P51795 746 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 DGKEP52429 567 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 BCL2L1Q07817 233 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 GPS1Q13098 491 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 UBXN2BQ14CS0 331 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 TPSAB1Q15661 275 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 NAPEPLDQ6IQ20 393 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 PPP1R21Q6ZMI0 780 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 PGBD5Q8N414 524 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 SPEM1Q8N4L4 309 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 MCUQ8NE86 351 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.43■□□□□ 0.22
VAMP1-205ENST00000535927 SNF8Q96H20 258 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 ADGRE3Q9BY15 652 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 FOXP3Q9BZS1 431 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 TSPYL1Q9H0U9 437 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 CHRDQ9H2X0 955 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 MFSD1Q9H3U5 465 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 C10orf88Q9H8K7 445 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 LRRC40Q9H9A6 602 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 RAB6BQ9NRW1 208 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 FAM114A2Q9NRY5 505 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 WHRNQ9P202 907 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 IL36AQ9UHA7 158 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 ASIC3Q9UHC3 531 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 HCN2Q9UL51 889 aa16.43■□□□□ 0.22
VAMP1-205ENST00000535927 TPX2Q9ULW0 747 aaKnown RBP16.43■□□□□ 0.22
VAMP1-205ENST00000535927 MUC22E2RYF6 1773 aaPredicted RBP16.43■□□□□ 0.22
VAMP1-205ENST00000535927 E7EVH7 732 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 C1QTNF3-AMACRE9PGA6 284 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 STK25O00506 426 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 HTRA2O43464 458 aaPredicted RBP16.42■□□□□ 0.22
VAMP1-205ENST00000535927 SUN1O94901 812 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 KLF8O95600 359 aaPredicted RBP16.42■□□□□ 0.22
VAMP1-205ENST00000535927 MCM3P25205 808 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 CCNHP51946 323 aaPredicted RBP16.42■□□□□ 0.22
VAMP1-205ENST00000535927 CALCOCO2Q13137 446 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 FZD5Q13467 585 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 MORF4L2Q15014 288 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 C2orf27AQ580R0 203 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 EMC10Q5UCC4 262 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 DUPD1Q68J44 220 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 BRAT1Q6PJG6 821 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 LEKR1Q6ZMV7 388 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 DPY19L3Q6ZPD9 716 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 CEP128Q6ZU80 1094 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 BMP8AQ7Z5Y6 402 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 PPIL6Q8IXY8 311 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 OR2T3Q8NH03 318 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 PPP1R16AQ96I34 528 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 FEM1CQ96JP0 617 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 LRRC1Q9BTT6 524 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 KCNH6Q9H252 994 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 ETNK1Q9HBU6 452 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 ARNT2Q9HBZ2 717 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 NOD2Q9HC29 1040 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 POLMQ9NP87 494 aaPredicted RBP16.42■□□□□ 0.22
VAMP1-205ENST00000535927 PRSS16Q9NQE7 514 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 PPM1HQ9ULR3 514 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 ATG2BQ96BY7 2078 aa16.42■□□□□ 0.22
VAMP1-205ENST00000535927 DNALI1O14645 258 aaPredicted RBP16.41■□□□□ 0.22
VAMP1-205ENST00000535927 MUSKO15146 869 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 ALDH1A2O94788 518 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 AP2A1O95782 977 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 ADH1BP00325 375 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 CD72P21854 359 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 IVDP26440 423 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 SEC13P55735 322 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 SKOR1P84550 965 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 CBLBQ13191 982 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 CUL1Q13616 776 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 LAMB3Q13751 1172 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 KCTD11Q693B1 232 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 Q6ZVU0 165 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 B4GALNT4Q76KP1 1039 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 PRPF39Q86UA1 669 aaKnown RBP16.41■□□□□ 0.22
VAMP1-205ENST00000535927 IFT20Q8IY31 132 aa16.41■□□□□ 0.22
VAMP1-205ENST00000535927 RYBPQ8N488 228 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms