RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 ADAM2Q99965 735 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 OMDQ99983 421 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 A0A0U1RQF3 1178 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 TARM1B6A8C7 271 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 GRID2O43424 1007 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 BUD23O43709 281 aaKnown RBP13.31□□□□□ -0.28
LDLR-203ENST00000535915 IGHA2P01877 340 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 ZNF157P51786 506 aaPredicted RBP13.31□□□□□ -0.28
LDLR-203ENST00000535915 SLC12A2P55011 1212 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 MTTPP55157 894 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 SCD5Q86SK9 330 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 SNX32Q86XE0 403 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 SCN4BQ8IWT1 228 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 CCNYL1Q8N7R7 359 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 PTCD2Q8WV60 388 aaKnown RBP13.31□□□□□ -0.28
LDLR-203ENST00000535915 GATA6Q92908 595 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 MRGPRX2Q96LB1 330 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 PAPOLBQ9NRJ5 636 aaKnown RBP13.31□□□□□ -0.28
LDLR-203ENST00000535915 CDYLQ9Y232 598 aa13.31□□□□□ -0.28
LDLR-203ENST00000535915 RGSL1A5PLK6 1076 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 OR4Q2P0C623 313 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 UBTFL6P0CB48 400 aaPredicted RBP13.3□□□□□ -0.28
LDLR-203ENST00000535915 CD151P48509 253 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 POLD2P49005 469 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 DLG1Q12959 904 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 GSTA3Q16772 222 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 PPM1LQ5SGD2 360 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 RNF111Q6ZNA4 994 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 C14orf80Q86SX3 495 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 CCDC117Q8IWD4 279 aaPredicted RBP13.3□□□□□ -0.28
LDLR-203ENST00000535915 LSMEM2Q8N112 164 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 RTL3Q8N8U3 475 aaKnown RBP13.3□□□□□ -0.28
LDLR-203ENST00000535915 NMUR1Q9HB89 426 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 SPC25Q9HBM1 224 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 VTI1BQ9UEU0 232 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 HS3ST4Q9Y661 456 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 A0A1W2PQH9 124 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 SLCO1B7G3V0H7 640 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 TNFRSF10BO14763 440 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 DNAJB1P25685 340 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 TAS2R39P59534 338 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 YWHAHQ04917 246 aaPredicted RBP13.3□□□□□ -0.28
LDLR-203ENST00000535915 CST9Q5W186 159 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 RANBP10Q6VN20 620 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 SGF29Q96ES7 293 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 CNDP1Q96KN2 507 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 CATSPER2Q96P56 530 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 GPR78Q96P69 363 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 MRPL46Q9H2W6 279 aaKnown RBP13.3□□□□□ -0.28
LDLR-203ENST00000535915 MRM3Q9HC36 420 aaKnown RBP13.3□□□□□ -0.28
LDLR-203ENST00000535915 TREX1Q9NSU2 369 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 IPO11Q9UI26 975 aaKnown RBP13.3□□□□□ -0.28
LDLR-203ENST00000535915 ADAMTS6Q9UKP5 1117 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 PACSIN3Q9UKS6 424 aa13.3□□□□□ -0.28
LDLR-203ENST00000535915 JUNP05412 331 aaKnown RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 PPARGP37231 505 aaPredicted RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 CYLC2Q14093 348 aaPredicted RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 NOMO2Q5JPE7 1267 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 LPCAT4Q643R3 524 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 TMEM198Q66K66 360 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 APLFQ8IW19 511 aaPredicted RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 C2CD4AQ8NCU7 369 aaPredicted RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 SUSD3Q96L08 255 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 FAM210AQ96ND0 272 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 NR1H4Q96RI1 486 aaPredicted RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 TBC1D13Q9NVG8 400 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 FBXO5Q9UKT4 447 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 MANSC4A6NHS7 340 aaPredicted RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 RAG1P15918 1043 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 WNT3AP56704 352 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 ITKQ08881 620 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 SLC39A12Q504Y0 691 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 TSTD2Q5T7W7 516 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 KIAA0930Q6ICG6 404 aaPredicted RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 C16orf89Q6UX73 402 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 KYQ8NBH2 561 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 RP9Q8TA86 221 aaKnown RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 HEXDCQ8WVB3 486 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 MARK4Q96L34 752 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 UROC1Q96N76 676 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 SERPINB11Q96P15 392 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 PRKD2Q9BZL6 878 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 VCX3BQ9H321 246 aa13.29□□□□□ -0.28
LDLR-203ENST00000535915 ABI2Q9NYB9 513 aaPredicted RBP13.29□□□□□ -0.28
LDLR-203ENST00000535915 A0A087X1B8 175 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 ARHGEF37A1IGU5 675 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 AURKAO14965 403 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 RTN3O95197 1032 aaPredicted RBP13.28□□□□□ -0.28
LDLR-203ENST00000535915 CPB1P15086 417 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 LPIN1Q14693 890 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 ARTNQ5T4W7 220 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 OR52E8Q6IFG1 317 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 NEPROQ6NW34 567 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 CNSTQ6PJW8 725 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 TFAP2DQ7Z6R9 452 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 RASAL3Q86YV0 1011 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 DSELQ8IZU8 1212 aa13.28□□□□□ -0.28
LDLR-203ENST00000535915 PDCD6IPQ8WUM4 868 aaKnown RBP13.28□□□□□ -0.28
LDLR-203ENST00000535915 NDNQ99608 321 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms