RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ZC3HC1Q86WB0 502 aaKnown RBP13.54□□□□□ -0.24
BEST1-208ENST00000534553 FAM217AQ8IXS0 508 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 SCG3Q8WXD2 468 aaKnown RBP13.54□□□□□ -0.24
BEST1-208ENST00000534553 MYEOVQ96EZ4 313 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 IL1RAPL1Q9NZN1 696 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 SLC17A6Q9P2U8 582 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 TLK1Q9UKI8 766 aa13.54□□□□□ -0.24
BEST1-208ENST00000534553 A0A096LPK6 155 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 A0A0D9SEW6 157 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 MROH6A6NGR9 719 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 H2AFYO75367 372 aaKnown RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 ATP5HO75947 161 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 HDCP19113 662 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 BGNP21810 368 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 KPNA2P52292 529 aaKnown RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 SLC7A9P82251 487 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 NSUN2Q08J23 767 aaKnown RBP eCLIP13.53□□□□□ -0.24
BEST1-208ENST00000534553 SEPT6Q14141 434 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 N4BP2L1Q5TBK1 243 aaPredicted RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 ESRP1Q6NXG1 681 aaKnown RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 PGBD5Q8N414 524 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 C2CD4AQ8NCU7 369 aaPredicted RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 PHOSPHO2Q8TCD6 241 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 C10orf82Q8WW14 230 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 AUTS2Q8WXX7 1259 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 ZFRQ96KR1 1074 aaKnown RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 ZNF778Q96MU6 729 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 LRRC37BQ96QE4 947 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 RAD9AQ99638 391 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 FAM96AQ9H5X1 160 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 IL21Q9HBE4 155 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 GKN1Q9NS71 199 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 THAP1Q9NVV9 213 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 CHD5Q8TDI0 1954 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 NDST3O95803 873 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 ATXN1LP0C7T5 689 aaKnown RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 IRF1P10914 325 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 HOXB8P17481 243 aaPredicted RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 CRABP2P29373 138 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 SCTRP47872 440 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 CD151P48509 253 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 LBX1P52954 281 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 CNGA3Q16281 694 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 GALNTL6Q49A17 601 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 INO80DQ53TQ3 878 aaPredicted RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 MPP7Q5T2T1 576 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 NEPROQ6NW34 567 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 LILRA6Q6PI73 481 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 Q6ZNB5 142 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 TMC7Q7Z402 723 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 CLEC14AQ86T13 490 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 METTL3Q86U44 580 aaKnown RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 CRLF3Q8IUI8 442 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 OR7D4Q8NG98 312 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 PPP1R14CQ8TAE6 165 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 RDH11Q8TC12 318 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 SPON2Q9BUD6 331 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 C12orf65Q9H3J6 166 aaKnown RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 TRPC7Q9HCX4 862 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 ABCF3Q9NUQ8 709 aa13.53□□□□□ -0.24
BEST1-208ENST00000534553 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 MTO1Q9Y2Z2 717 aaKnown RBP13.53□□□□□ -0.24
BEST1-208ENST00000534553 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.52□□□□□ -0.25
BEST1-208ENST00000534553 SOBPA7XYQ1 873 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 H0Y626 953 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 H0YHG0 523 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 GFRA2O00451 464 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 SNNO75324 88 aaPredicted RBP13.52□□□□□ -0.25
BEST1-208ENST00000534553 DNAJC8O75937 253 aaPredicted RBP13.52□□□□□ -0.25
BEST1-208ENST00000534553 CXCL14O95715 111 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 PROCP04070 461 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 LINC00271P0C7V0 271 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 ARNTP27540 789 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 GABRR2P28476 465 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 CA8P35219 290 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 CHRNA4P43681 627 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 CSRP3P50461 194 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 PRKAA2P54646 552 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 POU4F1Q01851 419 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 ACVR1Q04771 509 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 UBE3AQ05086 875 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 STX3Q13277 289 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 MSLNQ13421 630 aaPredicted RBP13.52□□□□□ -0.25
BEST1-208ENST00000534553 SLC12A1Q13621 1099 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 CHI3L2Q15782 390 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 SIRPB2Q5JXA9 342 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 CPXM2Q8N436 756 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 KLHL23Q8NBE8 558 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 BRSK1Q8TDC3 778 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 MUC3BQ9H195 1237 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 ATXN3LQ9H3M9 355 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 MFSD1Q9H3U5 465 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 ZNF334Q9HCZ1 680 aaPredicted RBP13.52□□□□□ -0.25
BEST1-208ENST00000534553 NPHS2Q9NP85 383 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 COPG2Q9UBF2 871 aa13.52□□□□□ -0.25
BEST1-208ENST00000534553 CORO1CQ9ULV4 474 aaPredicted RBP13.52□□□□□ -0.25
BEST1-208ENST00000534553 TRAV19A0A0A6YYK7 116 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms