RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ZZEF1O43149 2961 aa9.04□□□□□ -0.96
COPB1-211ENST00000534234 SPTY2D1-AS1A0A0U1RR47 76 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 SMTNL1A8MU46 457 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 WASH4PA8MWX3 477 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 AREL1O15033 823 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 TMCC1O94876 653 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 IGSF6O95976 241 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 GIMD1P0DJR0 217 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 ACP1P24666 158 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 RABIFP47224 123 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 RHOAP61586 193 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 HNRNPKP61978 463 aaKnown RBP eCLIP9.03□□□□□ -0.96
COPB1-211ENST00000534234 DAB2P98082 770 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 E2F1Q01094 437 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 OGDHQ02218 1023 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 MAMLD1Q13495 774 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 SERINC3Q13530 473 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 FZD2Q14332 565 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 PARP15Q460N3 678 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 FILIP1LQ4L180 1135 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 PPP1R2P3Q6NXS1 205 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 KYAT3Q6YP21 454 aaKnown RBP9.03□□□□□ -0.96
COPB1-211ENST00000534234 TMC6Q7Z403 805 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 ASB12Q8WXK4 309 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 BPIFA3Q9BQP9 254 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 SYT11Q9BT88 431 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 DONSONQ9NYP3 566 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 GGT7Q9UJ14 662 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 ITM2BQ9Y287 266 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 MFHAS1Q9Y4C4 1052 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 SPEGQ15772 3267 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 CABIN1Q9Y6J0 2220 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 LRRC53A6NM62 1247 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 SCAMP1O15126 338 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 FGF10O15520 208 aaPredicted RBP9.03□□□□□ -0.96
COPB1-211ENST00000534234 MMP20O60882 483 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 FTLP02792 175 aaPredicted RBP9.03□□□□□ -0.96
COPB1-211ENST00000534234 CSF2P04141 144 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 ALPPL2P10696 532 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 TIMP2P16035 220 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 ITIH2P19823 946 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 PSMA2P25787 234 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 TPI1P60174 286 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 PDE1CQ14123 709 aaPredicted RBP9.03□□□□□ -0.96
COPB1-211ENST00000534234 CYTH1Q15438 398 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 COL28A1Q2UY09 1125 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 LRRC73Q5JTD7 316 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 PLEKHA7Q6IQ23 1121 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 RFFLQ8WZ73 363 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 CENPTQ96BT3 561 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 APOLD1Q96LR9 279 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 CPEB1Q9BZB8 566 aaKnown RBP9.03□□□□□ -0.96
COPB1-211ENST00000534234 DHX35Q9H5Z1 703 aaKnown RBP9.03□□□□□ -0.96
COPB1-211ENST00000534234 HAUS4Q9H6D7 363 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 GPR27Q9NS67 375 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 GPATCH2LQ9NWQ4 482 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 NLGN3Q9NZ94 848 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 DKK3Q9UBP4 350 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 PCSK1NQ9UHG2 260 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 CLCA2Q9UQC9 943 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 AK5Q9Y6K8 562 aa9.03□□□□□ -0.96
COPB1-211ENST00000534234 PLXNA2O75051 1894 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 TMEM191CA6NGB0 347 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 J3KR12 359 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 K7ESM1 405 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 EEF2KO00418 725 aaKnown RBP9.02□□□□□ -0.97
COPB1-211ENST00000534234 INSIG1O15503 277 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 SPINT1O43278 529 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 DAPK3O43293 454 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 ATMINO43313 823 aaPredicted RBP9.02□□□□□ -0.97
COPB1-211ENST00000534234 NEBLO76041 1014 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 TM7SF2O76062 418 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 RNF8O76064 485 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 CKMT1AP12532 417 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 GZMAP12544 262 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 MYF5P13349 255 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 NME1P15531 152 aaKnown RBP9.02□□□□□ -0.97
COPB1-211ENST00000534234 HTR7P34969 479 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 ZNF165P49910 485 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 NDST2P52849 883 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 PFN3P60673 137 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 INSM1Q01101 510 aaPredicted RBP9.02□□□□□ -0.97
COPB1-211ENST00000534234 SEMG2Q02383 582 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 ASIC2Q16515 512 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 CA9Q16790 459 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 TPRG1LQ5T0D9 272 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 ERMARDQ5T6L9 678 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 KDM7AQ6ZMT4 941 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 ZNF571Q7Z3V5 609 aaPredicted RBP9.02□□□□□ -0.97
COPB1-211ENST00000534234 PARGQ86W56 976 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 DNAAF5Q86Y56 855 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 CACTIN-AS1Q8N1I8 211 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 ARFGAP1Q8N6T3 406 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 DENND6BQ8NEG7 585 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 CXorf40AQ8TE69 158 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 NXPE2Q96DL1 559 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 CELF6Q96J87 481 aaKnown RBP9.02□□□□□ -0.97
COPB1-211ENST00000534234 EXOC2Q96KP1 924 aa9.02□□□□□ -0.97
COPB1-211ENST00000534234 NAP1L5Q96NT1 182 aaPredicted RBP9.02□□□□□ -0.97
COPB1-211ENST00000534234 DUSP23Q9BVJ7 150 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms