RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 IRF2BP2Q7Z5L9 587 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 PTAR1Q7Z6K3 402 aaPredicted RBP12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 TTC7BQ86TV6 843 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 CACTIN-AS1Q8N1I8 211 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 PYROXD2Q8N2H3 581 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 AOPEPQ8N6M6 819 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 OR4C6Q8NH72 309 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 ASB12Q8WXK4 309 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 BMFQ96LC9 184 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 GDAP1L1Q96MZ0 367 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 KLHL32Q96NJ5 620 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 C1QTNF2Q9BXJ5 285 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 TTYH3Q9C0H2 523 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 PARVAQ9NVD7 372 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 DNAJC28Q9NX36 388 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 FZD10Q9ULW2 581 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 RAXQ9Y2V3 346 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 CHD5Q8TDI0 1954 aa12.6□□□□□ -0.39
CAPRIN1-213ENST00000533562 SPTY2D1-AS1A0A0U1RR47 76 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 POM121BA6NF01 834 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 WASH4PA8MWX3 477 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 FGF10O15520 208 aaPredicted RBP12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 PIAS2O75928 621 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 TMCC1O94876 653 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 IGSF6O95976 241 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 ATP1A3P13637 1013 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 RHOAP61586 193 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 DAB2P98082 770 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 SERINC3Q13530 473 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 FGL2Q14314 439 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 ANO6Q4KMQ2 910 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 HES3Q5TGS1 186 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 KYAT3Q6YP21 454 aaKnown RBP12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 TMC6Q7Z403 805 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 SLC22A18ASQ8N1D0 253 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 UMODL1-AS1Q8N2C9 162 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 NXPE2Q96DL1 559 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 BPIFA3Q9BQP9 254 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 DUSP23Q9BVJ7 150 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 C1QTNF7Q9BXJ2 289 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 NOL6Q9H6R4 1146 aaKnown RBP12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 EVA1BQ9NVM1 165 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 UCKL1Q9NWZ5 548 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 NLGN3Q9NZ94 848 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 MFHAS1Q9Y4C4 1052 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 IGSF10Q6WRI0 2623 aa12.59□□□□□ -0.39
CAPRIN1-213ENST00000533562 TMCO5BA8MYB1 307 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 EIF3CLB5ME19 914 aaKnown RBP12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 RASA4BC9J798 803 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 H3BM21 787 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 SCAMP1O15126 338 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 FFAR2O15552 330 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 TEX33O43247 280 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 RASA4O43374 803 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 CSF2P04141 144 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 DUSP3P51452 185 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 MAMLD1Q13495 774 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 PTK2BQ14289 1009 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 GRM3Q14832 879 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 ATXN7L2Q5T6C5 722 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 C19orf48Q6RUI8 117 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 PARGQ86W56 976 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 DENND6BQ8NEG7 585 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 HCAR2Q8TDS4 363 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 HNRNPLLQ8WVV9 542 aaKnown RBP12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 RFFLQ8WZ73 363 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 HMCESQ96FZ2 354 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 KLF6Q99612 283 aaPredicted RBP12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 EIF3CQ99613 913 aaKnown RBP12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 CPEB1Q9BZB8 566 aaKnown RBP12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 NRSN2Q9GZP1 204 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 USP29Q9HBJ7 922 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 SCUBE2Q9NQ36 999 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 GPR27Q9NS67 375 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 DKK3Q9UBP4 350 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 CLCA2Q9UQC9 943 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 AK5Q9Y6K8 562 aa12.58□□□□□ -0.4
CAPRIN1-213ENST00000533562 LOC400499M0QZD8 3231 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 TOR1BO14657 336 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 AREL1O15033 823 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 RAD51BO15315 384 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 DAPK3O43293 454 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 RNF8O76064 485 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 CKMT1AP12532 417 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 GZMAP12544 262 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 NME1P15531 152 aaKnown RBP12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 XPAP23025 273 aaPredicted RBP12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 PSMA2P25787 234 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 DEKP35659 375 aaKnown RBP12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 ABL2P42684 1182 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 SUOXP51687 545 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 NDST2P52849 883 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 TPI1P60174 286 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 INSM1Q01101 510 aaPredicted RBP12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 PDE1CQ14123 709 aaPredicted RBP12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 FZD2Q14332 565 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 ZNF542PQ5EBM4 170 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 ERMARDQ5T6L9 678 aa12.57□□□□□ -0.4
CAPRIN1-213ENST00000533562 PLEKHA7Q6IQ23 1121 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms