RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 CHRNB2P17787 502 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 SNRPD1P62314 119 aaKnown RBP23.2■■□□□ 1.3
PKP3-210ENST00000533249 TLE3Q04726 772 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 CDKN3Q16667 212 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 DEFB133Q30KQ1 61 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 ATXN7L2Q5T6C5 722 aaPredicted RBP23.2■■□□□ 1.3
PKP3-210ENST00000533249 ZCCHC8Q6NZY4 707 aaKnown RBP23.2■■□□□ 1.3
PKP3-210ENST00000533249 ZNF354CQ86Y25 554 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 CCDC185Q8N715 623 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 LMX1AQ8TE12 382 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 TBC1D31Q96DN5 1066 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 KLHL32Q96NJ5 620 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 LENG8Q96PV6 779 aaPredicted RBP23.2■■□□□ 1.3
PKP3-210ENST00000533249 MAGEH1Q9H213 219 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 NLRC4Q9NPP4 1024 aa23.2■■□□□ 1.3
PKP3-210ENST00000533249 GCN1Q92616 2671 aaKnown RBP23.2■■□□□ 1.3
PKP3-210ENST00000533249 CPED1A4D0V7 1026 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 C2CD4BA6NLJ0 364 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 ATXN7O15265 892 aaPredicted RBP23.19■■□□□ 1.3
PKP3-210ENST00000533249 SPINT1O43278 529 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 AQP9O43315 295 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 GSRP00390 522 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 PLEKP08567 350 aaPredicted RBP23.19■■□□□ 1.3
PKP3-210ENST00000533249 POLR2FP61218 127 aaKnown RBP23.19■■□□□ 1.3
PKP3-210ENST00000533249 MYLK3Q32MK0 819 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 ZSCAN23Q3MJ62 389 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 LRRC73Q5JTD7 316 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 STRADAQ7RTN6 431 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 GPR155Q7Z3F1 870 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 ZNF248Q8NDW4 579 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 FAM172AQ8WUF8 416 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 FAM207AQ9NSI2 230 aaPredicted RBP23.19■■□□□ 1.3
PKP3-210ENST00000533249 NEU3Q9UQ49 428 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 CSNK1G3Q9Y6M4 447 aa23.19■■□□□ 1.3
PKP3-210ENST00000533249 CXorf51AA0A1B0GTR3 108 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 POP4O95707 220 aaKnown RBP23.18■■□□□ 1.3
PKP3-210ENST00000533249 SOX5P35711 763 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 PTPN9P43378 593 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 HDAC4P56524 1084 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 PCBP4P57723 403 aaKnown RBP23.18■■□□□ 1.3
PKP3-210ENST00000533249 PFN3P60673 137 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 CXADRP78310 365 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 EIF2B5Q13144 721 aaKnown RBP23.18■■□□□ 1.3
PKP3-210ENST00000533249 GUSBP11Q6P575 273 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 VPS36Q86VN1 386 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 RBFAQ8N0V3 343 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 DENND6BQ8NEG7 585 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 ASB12Q8WXK4 309 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 ZNF578Q96N58 590 aaPredicted RBP23.18■■□□□ 1.3
PKP3-210ENST00000533249 RETREG1Q9H6L5 497 aa23.18■■□□□ 1.3
PKP3-210ENST00000533249 SYCE3A1L190 88 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 BUB1O43683 1085 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 TGM2P21980 687 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 THOP1P52888 689 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 C19orf57Q0VDD7 668 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 GDPD4Q6W3E5 623 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 EFL1Q7Z2Z2 1120 aaKnown RBP23.17■■□□□ 1.3
PKP3-210ENST00000533249 TTC7BQ86TV6 843 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 LSMEM2Q8N112 164 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 NETO2Q8NC67 525 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 VOPP1Q96AW1 172 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 ARHGEF26Q96DR7 871 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 IL12RB2Q99665 862 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 OSBPL1AQ9BXW6 950 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 TCEAL2Q9H3H9 227 aaPredicted RBP23.17■■□□□ 1.3
PKP3-210ENST00000533249 POLR1BQ9H9Y6 1135 aa23.17■■□□□ 1.3
PKP3-210ENST00000533249 TK2O00142 265 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 EPHB6O15197 1021 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 KDELR3O43731 214 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 MMP20O60882 483 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 TMCC1O94876 653 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 KRT3P12035 628 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 RFC1P35251 1148 aaPredicted RBP23.16■■□□□ 1.3
PKP3-210ENST00000533249 IGFALSP35858 605 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 LSSP48449 732 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 C1orf61Q13536 156 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 CRTC1Q6UUV9 634 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 TRIM72Q6ZMU5 477 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 PYROXD2Q8N2H3 581 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 CENPIQ92674 756 aaPredicted RBP23.16■■□□□ 1.3
PKP3-210ENST00000533249 GDAP1L1Q96MZ0 367 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 PCDHB18PQ96TA0 734 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 SELENOOQ9BVL4 669 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 APOBEC3BQ9UH17 382 aaKnown RBP23.16■■□□□ 1.3
PKP3-210ENST00000533249 SALL4Q9UJQ4 1053 aa23.16■■□□□ 1.3
PKP3-210ENST00000533249 AREL1O15033 823 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 C1QL1O75973 258 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 ITIH2P19823 946 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 NSFP46459 744 aaKnown RBP23.15■■□□□ 1.3
PKP3-210ENST00000533249 JAM2P57087 298 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 PTP4A2Q12974 167 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 KRT31Q15323 416 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 ISXQ2M1V0 245 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 PRRT3Q5FWE3 981 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 CT47A1Q5JQC4 288 aaPredicted RBP23.15■■□□□ 1.3
PKP3-210ENST00000533249 PHACTR4Q8IZ21 702 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 BTN2A2Q8WVV5 523 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 NTAN1Q96AB6 310 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 CENPTQ96BT3 561 aa23.15■■□□□ 1.3
PKP3-210ENST00000533249 HIC2Q96JB3 615 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms