RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 PLPP6Q8IY26 295 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 PPP1R16AQ96I34 528 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 BTBD6Q96KE9 485 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 CNDP2Q96KP4 475 aaKnown RBP18.07■□□□□ 0.48
SMG1-203ENST00000532700 EPAS1Q99814 870 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 SLC39A8Q9C0K1 460 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 ISCUQ9H1K1 167 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 RETREG1Q9H6L5 497 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 ERVMER34-1Q9H9K5 563 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 GPR27Q9NS67 375 aa18.07■□□□□ 0.48
SMG1-203ENST00000532700 PNMA8BQ9ULN7 279 aaPredicted RBP18.07■□□□□ 0.48
SMG1-203ENST00000532700 COL27A1Q8IZC6 1860 aaPredicted RBP18.06■□□□□ 0.48
SMG1-203ENST00000532700 CXorf51AA0A1B0GTR3 108 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 IGLON5A6NGN9 336 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 DFNA5O60443 496 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 PAK4O96013 591 aaPredicted RBP18.06■□□□□ 0.48
SMG1-203ENST00000532700 GZMAP12544 262 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 HNRNPA2B1P22626 353 aaKnown RBP18.06■□□□□ 0.48
SMG1-203ENST00000532700 UBASH3AP57075 661 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 SLC45A4Q5BKX6 768 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 ZNF805Q5CZA5 627 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 AFMIDQ63HM1 303 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 TMPRSS7Q7RTY8 843 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 CPLX3Q8WVH0 158 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 ARHGEF26Q96DR7 871 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 KLHDC7BQ96G42 594 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 CALN1Q9BXU9 219 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 SLC17A9Q9BYT1 436 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 TPX2Q9ULW0 747 aaKnown RBP18.06■□□□□ 0.48
SMG1-203ENST00000532700 LRP4O75096 1905 aa18.06■□□□□ 0.48
SMG1-203ENST00000532700 SRRM3A6NNA2 597 aaPredicted RBP18.05■□□□□ 0.48
SMG1-203ENST00000532700 EEF2KO00418 725 aaKnown RBP18.05■□□□□ 0.48
SMG1-203ENST00000532700 ENC1O14682 589 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 AREL1O15033 823 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 AP1G1O43747 822 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 GYPCP04921 128 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 TPM3P06753 285 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 MYF5P13349 255 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 NUDT1P36639 197 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 ACADVLP49748 655 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 PAPOLAP51003 745 aaKnown RBP18.05■□□□□ 0.48
SMG1-203ENST00000532700 AIF1P55008 147 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 RHOAP61586 193 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 SNRPD1P62314 119 aaKnown RBP18.05■□□□□ 0.48
SMG1-203ENST00000532700 SEMG2Q02383 582 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 CAMK2BQ13554 666 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 FIGNQ5HY92 759 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 ERMARDQ5T6L9 678 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 GDPD4Q6W3E5 623 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 RFX8Q6ZV50 586 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 MDM1Q8TC05 714 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 TSC1Q92574 1164 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 SKA1Q96BD8 255 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 C1QTNF2Q9BXJ5 285 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 ETNK2Q9NVF9 386 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 CWC15Q9P013 229 aaKnown RBP18.05■□□□□ 0.48
SMG1-203ENST00000532700 IFNKQ9P0W0 207 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 KLF15Q9UIH9 416 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 HPCAL4Q9UM19 191 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 DMXL2Q8TDJ6 3036 aa18.05■□□□□ 0.48
SMG1-203ENST00000532700 A0A087X0T9 212 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 MUSKO15146 869 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 FGF10O15520 208 aaPredicted RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 BUB1BO60566 1050 aaPredicted RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 PRAMEF11O60813 436 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 POP4O95707 220 aaKnown RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 PRKCGP05129 697 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 FAM228BP0C875 321 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 TIMP2P16035 220 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 ERCC2P18074 760 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 AKT2P31751 481 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 ARRB1P49407 418 aaPredicted RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 GEMIN4P57678 1058 aaKnown RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 YBEYP58557 167 aaPredicted RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 DPYSQ14117 519 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 FZD2Q14332 565 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 SMTNL2Q2TAL5 461 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 PARP15Q460N3 678 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 TDRD12Q587J7 1177 aaKnown RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 PPP6R3Q5H9R7 873 aaPredicted RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 KIAA1161Q6NSJ0 714 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 Q6ZSR6 202 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 PTAR1Q7Z6K3 402 aaPredicted RBP18.04■□□□□ 0.48
SMG1-203ENST00000532700 GDAP1L1Q96MZ0 367 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 EDEM3Q9BZQ6 932 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 THAP2Q9H0W7 228 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 CATSPERBQ9H7T0 1116 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 NENFQ9UMX5 172 aa18.04■□□□□ 0.48
SMG1-203ENST00000532700 SHROOM3Q8TF72 1996 aa18.03■□□□□ 0.48
SMG1-203ENST00000532700 A0A1W2PQJ5 194 aa18.03■□□□□ 0.48
SMG1-203ENST00000532700 TTC24A2A3L6 582 aaPredicted RBP18.03■□□□□ 0.48
SMG1-203ENST00000532700 MMP20O60882 483 aa18.03■□□□□ 0.48
SMG1-203ENST00000532700 LDOC1O95751 146 aaPredicted RBP18.03■□□□□ 0.48
SMG1-203ENST00000532700 DGKAP23743 735 aa18.03■□□□□ 0.48
SMG1-203ENST00000532700 IGFALSP35858 605 aa18.03■□□□□ 0.48
SMG1-203ENST00000532700 RPS21P63220 83 aaKnown RBP18.03■□□□□ 0.48
SMG1-203ENST00000532700 OVGP1Q12889 678 aa18.03■□□□□ 0.48
SMG1-203ENST00000532700 SMAD1Q15797 465 aaKnown RBP18.03■□□□□ 0.48
SMG1-203ENST00000532700 PROX2Q3B8N5 592 aa18.03■□□□□ 0.48
SMG1-203ENST00000532700 FNIP1Q8TF40 1166 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms