RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 NKX2-5P52952 324 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ILF2Q12905 390 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 AARS2Q5JTZ9 985 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 FBXO46Q6PJ61 603 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM270Q6UE05 265 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ARCQ7LC44 396 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PTAR1Q7Z6K3 402 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 RBM23Q86U06 439 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 GALNT12Q8IXK2 581 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 APPL2Q8NEU8 664 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 KCTD4Q8WVF5 259 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 FIG4Q92562 907 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 TMIGD2Q96BF3 282 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 HEXIM2Q96MH2 286 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PGLYRP2Q96PD5 576 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 MECRQ9BV79 373 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 TP63Q9H3D4 680 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 RMND5AQ9H871 391 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ENTPD7Q9NQZ7 604 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 TAS2R14Q9NYV8 317 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 KLHL3Q9UH77 587 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 STOML2Q9UJZ1 356 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC45A1Q9Y2W3 748 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PCDHB7Q9Y5E2 793 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 A0A0C4DFX4 3053 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 GSTA4O15217 222 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 RGS5O15539 181 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 EDIL3O43854 480 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 SH3BP5O60239 455 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 WBP4O75554 376 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PRKD3O94806 890 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 RHOBTB1O94844 696 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ITGB3P05106 788 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 STAG3L1P0CL83 205 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 FGFR1P11362 822 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 CSF2RAP15509 400 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 GRIA2P42262 883 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 LSM3P62310 102 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PURAQ00577 322 aaKnown RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 C5orf22Q49AR2 442 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 C16orf46Q6P387 395 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 NOTUMQ6P988 496 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 GPR180Q86V85 440 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 REM2Q8IYK8 340 aaPredicted RBP6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC15A4Q8N697 577 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 UBASH3BQ8TF42 649 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ATL1Q8WXF7 558 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF560Q96MR9 790 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 ZSCAN5AQ9BUG6 496 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 C2orf40Q9H1Z8 148 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 RAB6BQ9NRW1 208 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.86□□□□□ -1.312e-7■■■■□ 21.2
TGFBR3-209ENST00000532540 PADI3Q9ULW8 664 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 PLA2G4CQ9UP65 541 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 NR2E3Q9Y5X4 410 aa6.86□□□□□ -1.31
TGFBR3-209ENST00000532540 IGSF9BQ9UPX0 1349 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 DNAJC25-GNG10A0A024R161 153 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 TOR1BO14657 336 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ADORA2BP29275 332 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 PRDX6P30041 224 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 KPNA2P52292 529 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 EFNA5P52803 228 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ROR1Q01973 937 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 SCRN3Q0VDG4 424 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 TFDP2Q14188 446 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 SF3B4Q15427 424 aaKnown RBP eCLIP6.85□□□□□ -1.316e-8■□□□□ 8.6
TGFBR3-209ENST00000532540 CYP1B1Q16678 543 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 MTX3Q5HYI7 312 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 OGFRL1Q5TC84 451 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 SEL1L3Q68CR1 1132 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 FOXR2Q6PJQ5 311 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 PLEKHM3Q6ZWE6 761 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 PAGE2Q7Z2X7 111 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 C16orf62Q7Z3J2 963 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 BPHLQ86WA6 291 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 C12orf56Q8IXR9 622 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 GPD1LQ8N335 351 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 EXD1Q8NHP7 514 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 RNF34Q969K3 372 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 QKIQ96PU8 341 aaKnown RBP eCLIP6.85□□□□□ -1.318e-7■■■■□ 22
TGFBR3-209ENST00000532540 CTRCQ99895 268 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM246Q9BRR3 403 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 IGFLR1Q9H665 355 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ARMC1Q9NVT9 282 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 UCKL1Q9NWZ5 548 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 MRPL39Q9NYK5 338 aaKnown RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 EMC3Q9P0I2 261 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 POU2F3Q9UKI9 436 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 CDC14AQ9UNH5 594 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 A0A1W2PRG6 482 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 CCDC182A6NF36 153 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 UNCXA6NJT0 531 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 PTGES3LE9PB15 166 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ANGPT2O15123 496 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 TSPAN1O60635 241 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ARF4P18085 180 aaPredicted RBP6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 ELK3P41970 407 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 RAP1GAPP47736 663 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 CDH8P55286 799 aa6.85□□□□□ -1.31
TGFBR3-209ENST00000532540 KLF10Q13118 480 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms