RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TIMP2P16035 220 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 CD27P26842 260 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 ABL2P42684 1182 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 IHHQ14623 411 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 LBRQ14739 615 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 TRIM61Q5EBN2 209 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 TMCO4Q5TGY1 634 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 GDPD4Q6W3E5 623 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 SRLQ86TD4 932 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 ZSWIM9Q86XI8 627 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 RGL4Q8IZJ4 473 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 RYBPQ8N488 228 aaPredicted RBP14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 CEP76Q8TAP6 659 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 LRRN4Q8WUT4 740 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 MAML1Q92585 1016 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 CALR3Q96L12 384 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 KLHL32Q96NJ5 620 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 OLFM3Q96PB7 478 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 HERPUD2Q9BSE4 406 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 OSBPL1AQ9BXW6 950 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 FSCN3Q9NQT6 498 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 DKK3Q9UBP4 350 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 SLC6A14Q9UN76 642 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 ZFR2Q9UPR6 939 aaKnown RBP14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 PCDHA3Q9Y5H8 950 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 FADS3Q9Y5Q0 445 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 LRRK1Q38SD2 2015 aa14.12□□□□□ -0.15
TSPAN4-220ENST00000532375 CABIN1Q9Y6J0 2220 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3DA0A087WVF3 549 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3IA0A087WXS9 549 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3EA0A087X179 549 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3KA0A087X1G2 549 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 A0A1B0GTW7 788 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TTC24A2A3L6 582 aaPredicted RBP14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3FA6NER0 549 aaPredicted RBP14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 GOLGA6L3A6NEY3 463 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 MEI4A8MW99 385 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3LB9A6J9 549 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TRAFD1O14545 582 aaPredicted RBP14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TM4SF5O14894 197 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 ARHGAP6O43182 974 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 AP1G1O43747 822 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3HP0C7X1 549 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 KRT10P13645 584 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 ADRB3P13945 408 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 ITIH2P19823 946 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 CCNCP24863 283 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 CTNNA2P26232 953 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 CTNNA1P35221 906 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 NEK3P51956 506 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 LIMK1P53667 647 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 LMNB2Q03252 620 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 HNRNPDQ14103 355 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3GQ6DHY5 549 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3CQ6IPX1 549 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 NEK5Q6P3R8 708 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 NPNTQ6UXI9 565 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 SPOCD1Q6ZMY3 1216 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 DAAM2Q86T65 1068 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 KIAA1328Q86T90 577 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 NT5DC3Q86UY8 548 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TRIM69Q86WT6 500 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 CAMK1DQ8IU85 385 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TBC1D3Q8IZP1 549 aaPredicted RBP14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 ZCCHC9Q8N567 271 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 ATPAF2Q8N5M1 289 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 KIAA1524Q8TCG1 905 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 HCAR2Q8TDS4 363 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 ECHDC3Q96DC8 303 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 MGME1Q9BQP7 344 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 SUV39H2Q9H5I1 410 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 PREBQ9HCU5 417 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 TM9SF3Q9HD45 589 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 DLL3Q9NYJ7 618 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 SEPT3Q9UH03 358 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 DNAH14Q0VDD8 3507 aa14.11□□□□□ -0.15
TSPAN4-220ENST00000532375 hCG_1818297A0A087WSY0 165 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 A0A1W2PR77 199 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 GOLGA6L6A8MZA4 724 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 PRR5-ARHGAP8B1AHC4 643 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 MATN3O15232 486 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 BCAT2O15382 392 aaPredicted RBP14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 ZRANB2O95218 330 aaKnown RBP eCLIP14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 PIGNO95427 931 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 WNT1P04628 370 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 ARHGAP8P85298 464 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 KIF5AQ12840 1032 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 FGL2Q14314 439 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 IFI16Q16666 785 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 ZNF284Q2VY69 593 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 TMEM259Q4ZIN3 620 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 ZFYVE27Q5T4F4 411 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 RCOR2Q8IZ40 523 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 EXD1Q8NHP7 514 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 SPOCK2Q92563 424 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 ALG3Q92685 438 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 HDAC11Q96DB2 347 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 RMDN1Q96DB5 314 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 PPP1R16AQ96I34 528 aa14.1□□□□□ -0.15
TSPAN4-220ENST00000532375 ZNF641Q96N77 438 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms