RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 ZNF16P17020 682 aaPredicted RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC6A4P31645 630 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 SOX5P35711 763 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 EIF2S3P41091 472 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 ABCG1P45844 678 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 RNASE9P60153 205 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 FMO1Q01740 532 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC6A3Q01959 620 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 GOLGA8FQ08AF8 430 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 GOLGA8DPQ0D2H9 430 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 EIF4EBP2Q13542 120 aaPredicted RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 PWP1Q13610 501 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 NR1I3Q14994 352 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 MEA1Q16626 185 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 SYCP2LQ5T4T6 812 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 LETMD1Q6P1Q0 360 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 MSANTD2Q6P1R3 559 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 DHRS13Q6UX07 377 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 RABEPKQ7Z6M1 372 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 NEK11Q8NG66 645 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC30A5Q8TAD4 765 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 DQX1Q8TE96 717 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC39A13Q96H72 371 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 FCRL2Q96LA5 508 aaPredicted RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 CDK5RAP1Q96SZ6 601 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 DPH2Q9BQC3 489 aaPredicted RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 TM7SF3Q9NS93 570 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 OLA1Q9NTK5 396 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 DNAJC17Q9NVM6 304 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 KIAA1522Q9P206 1035 aaPredicted RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 DKK4Q9UBT3 224 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 NOCTQ9UK39 431 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 LSM7Q9UK45 103 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 TPX2Q9ULW0 747 aaKnown RBP7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 NUMA1Q14980 2115 aa7.22□□□□□ -1.25
TRIM53CP-201ENST00000531490 SYNJ2BP-COX16A0A087WUM0 186 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 A0A1B0GTW7 788 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 MEI4A8MW99 385 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 CBX4O00257 560 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 CAPN9O14815 690 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TLX3O43711 291 aaPredicted RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 CACNG3O60359 315 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 ZNF217O75362 1048 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 BPNT1O95861 308 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TRUB2O95900 331 aaKnown RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 PENKP01210 267 aaPredicted RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 CYP1A1P04798 512 aaPredicted RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TPM2P07951 284 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 KRT10P13645 584 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 CD6P30203 668 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 CDH5P33151 784 aaPredicted RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 CHKAP35790 457 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 STAT1P42224 750 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 GABRB2P47870 512 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 HARS2P49590 506 aaKnown RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 CSNK1EP49674 416 aaKnown RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TBX4P57082 545 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 NOMO3P69849 1222 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 IL9RQ01113 521 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 SEMG2Q02383 582 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 PLCL1Q15111 1095 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 GEN1Q17RS7 908 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 KIF19Q2TAC6 998 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 RAB6CQ53S08 254 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 DCAF6Q58WW2 860 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 FAM133BQ5BKY9 247 aaKnown RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 WDR45BQ5MNZ6 344 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 ADGRF1Q5T601 910 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 NAA35Q5VZE5 725 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TMEM215Q68D42 235 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC6A19Q695T7 634 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 NADSYN1Q6IA69 706 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 GRAMD4Q6IC98 578 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TRNP1Q6NT89 227 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 PCSK4Q6UW60 755 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 OLFML1Q6UWY5 402 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TRMT11Q7Z4G4 463 aaKnown RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 IRF2BP2Q7Z5L9 587 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 ZNF605Q86T29 641 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TAC4Q86UU9 113 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 ERICH1Q86X53 443 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 DNAAF5Q86Y56 855 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 MCATQ8IVS2 390 aaKnown RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 FAM217AQ8IXS0 508 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TMEM35BQ8NCS4 154 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 ANKRD20A12PQ8NF67 263 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 DDI1Q8WTU0 396 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 DNASE2BQ8WZ79 361 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 C18orf8Q96DM3 657 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 TMA16Q96EY4 203 aaKnown RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC2A13Q96QE2 648 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 SPAG5Q96R06 1193 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 GABRG3Q99928 467 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 DCLK3Q9C098 648 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 MKRN2Q9H000 416 aaKnown RBP7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 RAB6CQ9H0N0 254 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 PDCL3Q9H2J4 239 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 PRORYQ9H606 182 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 POPDC2Q9HBU9 364 aa7.21□□□□□ -1.25
TRIM53CP-201ENST00000531490 COX16Q9P0S2 106 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms