RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SUMF1Q8NBK3 374 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 TTC13Q8NBP0 860 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 CCNYQ8ND76 341 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 LRRN4Q8WUT4 740 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 TFB1MQ8WVM0 346 aaKnown RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 ARRDC3Q96B67 414 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 ECHDC3Q96DC8 303 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 EXOC2Q96KP1 924 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 SPACA7Q96KW9 195 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 ZNF641Q96N77 438 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 DUSP15Q9H1R2 295 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 KDM4CQ9H3R0 1056 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 SGK2Q9HBY8 427 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 FBXL12Q9NXK8 326 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 EVLQ9UI08 416 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 TTC7AQ9ULT0 858 aaPredicted RBP14.65□□□□□ -0.06
CPSF1-206ENST00000531480 CYP8B1Q9UNU6 501 aa14.65□□□□□ -0.06
CPSF1-206ENST00000531480 A0A1W2PP55 124 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 TCRBV7S2A1N4TA0A589 114 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 BCLAF3A2AJT9 711 aaKnown RBP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 KCNK1O00180 336 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 KRIT1O00522 736 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 CES2O00748 559 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 TRAFD1O14545 582 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 KCNK3O14649 394 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 INSIG1O15503 277 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 HTRA2O43464 458 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 BNIP3LO60238 219 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 GKP32189 559 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 WASHC5Q12768 1159 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 CNTN1Q12860 1018 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 IHHQ14623 411 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 SIX1Q15475 284 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 TEX44Q53QW1 395 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 SEL1L2Q5TEA6 688 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 GDPD4Q6W3E5 623 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 RASGEF1CQ8N431 466 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 CADM4Q8NFZ8 388 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 OR6K2Q8NGY2 324 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 SLC35B2Q8TB61 432 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 ARRDC2Q8TBH0 407 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 GRIN3AQ8TCU5 1115 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 NKD2Q969F2 451 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 TADA1Q96BN2 335 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 TOE1Q96GM8 510 aaKnown RBP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 PPP1R16AQ96I34 528 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 VAT1Q99536 393 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 FRMD8P1Q9BZ68 369 aaPredicted RBP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 POLR1EQ9GZS1 481 aaKnown RBP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 NEUROG2Q9H2A3 272 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 ZDHHC6Q9H6R6 413 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 RBM22Q9NW64 420 aaKnown RBP eCLIP14.64□□□□□ -0.07
CPSF1-206ENST00000531480 OTOGLQ3ZCN5 2332 aa14.64□□□□□ -0.07
CPSF1-206ENST00000531480 ZFHX2Q9C0A1 2572 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 KPNA3O00505 521 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 ENC1O14682 589 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 PLRG1O43660 514 aaKnown RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 AP1G1O43747 822 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 GJB3O75712 270 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 ZNF189O75820 626 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 ATP1A1P05023 1023 aaKnown RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 HLA-DQB2P05538 268 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 PTPN3P26045 913 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 ACSL1P33121 698 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 SCNN1BP51168 640 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 ADPRHP54922 357 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 TAS2R38P59533 333 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 AP1B1Q10567 949 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 TUBB2AQ13885 445 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 SIM2Q14190 667 aaPredicted RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 SLC14A2Q15849 920 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 ERN2Q76MJ5 926 aaKnown RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 ZC3H18Q86VM9 953 aaKnown RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 CACUL1Q86Y37 369 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 HDDC3Q8N4P3 179 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 HAUS1Q96CS2 278 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 LOXL4Q96JB6 756 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 PBKQ96KB5 322 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 TEKT5Q96M29 485 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 TUBB2BQ9BVA1 445 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 BTBD1Q9H0C5 482 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 SUV39H2Q9H5I1 410 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 USP29Q9HBJ7 922 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 NOD2Q9HC29 1040 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 NT5MQ9NPB1 228 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 HAUS2Q9NVX0 235 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 NCKAP1Q9Y2A7 1128 aa14.63□□□□□ -0.07
CPSF1-206ENST00000531480 R3HDM2Q9Y2K5 976 aaKnown RBP14.63□□□□□ -0.07
CPSF1-206ENST00000531480 GPR179Q6PRD1 2367 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 C16orf96A6NNT2 1141 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 FANCGO15287 622 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 FZD6O60353 706 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 SOCS5O75159 536 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 RNASEH2AO75792 299 aaKnown RBP14.62□□□□□ -0.07
CPSF1-206ENST00000531480 JCHAINP01591 159 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 UGT2B4P06133 528 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 RBP3P10745 1247 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 ADRB3P13945 408 aa14.62□□□□□ -0.07
CPSF1-206ENST00000531480 PRLRP16471 622 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms