RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TMCC1O94876 653 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 GJB6O95452 261 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 IGSF6O95976 241 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 ANXA6P08133 673 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 TGM2P21980 687 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 IGFALSP35858 605 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 LSSP48449 732 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 RPIAP49247 311 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 RHOAP61586 193 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 RAD51Q06609 339 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 C1orf61Q13536 156 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 TCEA2Q15560 299 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 ISXQ2M1V0 245 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 PRRT3Q5FWE3 981 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 TPRG1LQ5T0D9 272 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 RBM44Q6ZP01 1051 aaKnown RBP16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 ARCQ7LC44 396 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 BNIPLQ7Z465 357 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 ZNF677Q86XU0 584 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 SLC30A5Q8TAD4 765 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 GPT2Q8TD30 523 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 FAM172AQ8WUF8 416 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 KLF6Q99612 283 aaPredicted RBP16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 NAA15Q9BXJ9 866 aaKnown RBP16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 STK33Q9BYT3 514 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 SLC13A1Q9BZW2 595 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 NUP62CLQ9H1M0 184 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 MAGEH1Q9H213 219 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 CPNE5Q9HCH3 593 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 FAM207AQ9NSI2 230 aaPredicted RBP16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 SEPT11Q9NVA2 429 aaKnown RBP16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 KLF15Q9UIH9 416 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 NOCTQ9UK39 431 aaKnown RBP16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 DOLKQ9UPQ8 538 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 CSNK1G3Q9Y6M4 447 aa16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 GCN1Q92616 2671 aaKnown RBP16.05■□□□□ 0.16
CHMP4A-204ENST00000530996 FAM72CH0Y354 149 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 SPINT1O43278 529 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 LRIG2O94898 1065 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 POP4O95707 220 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 CD160O95971 181 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 PLEKP08567 350 aaPredicted RBP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 EEF1GP26641 437 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 ADRA1BP35368 520 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 NSFP46459 744 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 ERVPABLB-1P60509 514 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 CDR2Q01850 454 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 SYCP1Q15431 976 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 MYLK3Q32MK0 819 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 CCDC14Q49A88 953 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 TCP11X2Q5H9J9 407 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 FAXCQ5TGI0 409 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 FAM72AQ5TYM5 149 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 MANEALQ5VSG8 457 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 FAM72DQ6L9T8 149 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 DPY19L2P1Q6NXN4 242 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 GDPD4Q6W3E5 623 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 TTC7BQ86TV6 843 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 NLRP14Q86W24 1093 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 FAM72BQ86X60 149 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 CCDC185Q8N715 623 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 JOSD2Q8TAC2 188 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 ATXN7L3BQ96GX2 97 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 HIC2Q96JB3 615 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 LENG8Q96PV6 779 aaPredicted RBP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 EPAS1Q99814 870 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 WRAP53Q9BUR4 548 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 SELENOOQ9BVL4 669 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 TCEAL2Q9H3H9 227 aaPredicted RBP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 NLRC4Q9NPP4 1024 aa16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 SAMSN1Q9NSI8 373 aaKnown RBP16.04■□□□□ 0.16
CHMP4A-204ENST00000530996 ZSCAN5CA6NGD5 496 aaPredicted RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 ERVH48-1M5A8F1 160 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 RIOK3O14730 519 aaKnown RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 MMP20O60882 483 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 TM7SF2O76062 418 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 DXOO77932 396 aaKnown RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 MMP8P22894 467 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 PTPN9P43378 593 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 ADKP55263 362 aaKnown RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 PFN3P60673 137 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 POLR2FP61218 127 aaKnown RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 NRG1Q02297 640 aaPredicted RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 EIF2B5Q13144 721 aaKnown RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 EFHC2Q5JST6 749 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 FKBP15Q5T1M5 1219 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 ARTNQ5T4W7 220 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 CFAP58Q5T655 872 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 TRIM72Q6ZMU5 477 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 STRADAQ7RTN6 431 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 PLPP6Q8IY26 295 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 LSM14AQ8ND56 463 aaKnown RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 TPCN2Q8NHX9 752 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 NAT6Q93015 286 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 PCMTD1Q96MG8 357 aaPredicted RBP16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 LRRC61Q9BV99 259 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 GANQ9H2C0 597 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 SALL4Q9UJQ4 1053 aa16.03■□□□□ 0.16
CHMP4A-204ENST00000530996 BPTFQ12830 3046 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms