RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 AADATQ8N5Z0 425 aa21.01■□□□□ 0.95
CD44-222ENST00000526025 ATP13A3Q9H7F0 1226 aa21.01■□□□□ 0.95
CD44-222ENST00000526025 SGK2Q9HBY8 427 aa21.01■□□□□ 0.95
CD44-222ENST00000526025 HOMER3Q9NSC5 361 aa21.01■□□□□ 0.95
CD44-222ENST00000526025 FBXL12Q9NXK8 326 aa21.01■□□□□ 0.95
CD44-222ENST00000526025 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.01■□□□□ 0.95
CD44-222ENST00000526025 DKK3Q9UBP4 350 aa21.01■□□□□ 0.95
CD44-222ENST00000526025 NUMA1Q14980 2115 aa21.01■□□□□ 0.95
CD44-222ENST00000526025 WDFY4Q6ZS81 3184 aa21■□□□□ 0.95
CD44-222ENST00000526025 THADAQ6YHU6 1953 aa21■□□□□ 0.95
CD44-222ENST00000526025 IGHV1OR15-9A0A0B4J2B8 117 aa21■□□□□ 0.95
CD44-222ENST00000526025 A0A1W2PQ67 120 aa21■□□□□ 0.95
CD44-222ENST00000526025 TSPAN11A1L157 253 aa21■□□□□ 0.95
CD44-222ENST00000526025 CFAP69A5D8W1 941 aa21■□□□□ 0.95
CD44-222ENST00000526025 KPNA3O00505 521 aaPredicted RBP21■□□□□ 0.95
CD44-222ENST00000526025 INSIG1O15503 277 aa21■□□□□ 0.95
CD44-222ENST00000526025 SOCS5O75159 536 aa21■□□□□ 0.95
CD44-222ENST00000526025 HLA-DQB2P05538 268 aa21■□□□□ 0.95
CD44-222ENST00000526025 PTPN3P26045 913 aa21■□□□□ 0.95
CD44-222ENST00000526025 SERPINA4P29622 427 aa21■□□□□ 0.95
CD44-222ENST00000526025 DRD3P35462 400 aa21■□□□□ 0.95
CD44-222ENST00000526025 SCNN1BP51168 640 aa21■□□□□ 0.95
CD44-222ENST00000526025 WASHC5Q12768 1159 aa21■□□□□ 0.95
CD44-222ENST00000526025 SIX1Q15475 284 aaPredicted RBP21■□□□□ 0.95
CD44-222ENST00000526025 SLC14A2Q15849 920 aa21■□□□□ 0.95
CD44-222ENST00000526025 SPDYCQ5MJ68 293 aa21■□□□□ 0.95
CD44-222ENST00000526025 GDPD4Q6W3E5 623 aa21■□□□□ 0.95
CD44-222ENST00000526025 NYAP1Q6ZVC0 841 aa21■□□□□ 0.95
CD44-222ENST00000526025 C17orf53Q8N3J3 647 aaPredicted RBP21■□□□□ 0.95
CD44-222ENST00000526025 CNTD1Q8N815 330 aa21■□□□□ 0.95
CD44-222ENST00000526025 OR6K2Q8NGY2 324 aa21■□□□□ 0.95
CD44-222ENST00000526025 ACTRT1Q8TDG2 376 aa21■□□□□ 0.95
CD44-222ENST00000526025 LRRN4Q8WUT4 740 aa21■□□□□ 0.95
CD44-222ENST00000526025 NKD2Q969F2 451 aaPredicted RBP21■□□□□ 0.95
CD44-222ENST00000526025 TEKT5Q96M29 485 aa21■□□□□ 0.95
CD44-222ENST00000526025 PCED1AQ9H1Q7 454 aa21■□□□□ 0.95
CD44-222ENST00000526025 KDM4CQ9H3R0 1056 aa21■□□□□ 0.95
CD44-222ENST00000526025 SCUBE2Q9NQ36 999 aa21■□□□□ 0.95
CD44-222ENST00000526025 DYRK4Q9NR20 520 aa21■□□□□ 0.95
CD44-222ENST00000526025 TRHDEQ9UKU6 1024 aa21■□□□□ 0.95
CD44-222ENST00000526025 R3HDM2Q9Y2K5 976 aaKnown RBP21■□□□□ 0.95
CD44-222ENST00000526025 ABCA7Q8IZY2 2146 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 HRO43593 1189 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 CD6P30203 668 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 SUOXP51687 545 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 CCNG2Q16589 344 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 DARS2Q6PI48 645 aaKnown RBP20.99■□□□□ 0.95
CD44-222ENST00000526025 BRAT1Q6PJG6 821 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 CACUL1Q86Y37 369 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 HDDC3Q8N4P3 179 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 RAB7BQ96AH8 199 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 ARRDC3Q96B67 414 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 OMDQ99983 421 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 SEMA4AQ9H3S1 761 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 SUV39H2Q9H5I1 410 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 WSB2Q9NYS7 404 aaPredicted RBP20.99■□□□□ 0.95
CD44-222ENST00000526025 CYP8B1Q9UNU6 501 aa20.99■□□□□ 0.95
CD44-222ENST00000526025 A0A1W2PP55 124 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 RNF103O00237 685 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 LIASO43766 372 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 TUBB4AP04350 444 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 UGT2B4P06133 528 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 RBL1P28749 1068 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 GKP32189 559 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 MAXP61244 160 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 BCL2L1Q07817 233 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 OASLQ15646 514 aaKnown RBP20.98■□□□□ 0.95
CD44-222ENST00000526025 LONRF2Q1L5Z9 754 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 AGBL4Q5VU57 503 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 ERN2Q76MJ5 926 aaKnown RBP20.98■□□□□ 0.95
CD44-222ENST00000526025 ARRDC2Q8TBH0 407 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 ECHDC3Q96DC8 303 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 ZC3H10Q96K80 434 aaKnown RBP20.98■□□□□ 0.95
CD44-222ENST00000526025 SEMA3CQ99985 751 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 BTBD1Q9H0C5 482 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 EPC1Q9H2F5 836 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 USP29Q9HBJ7 922 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 NOD2Q9HC29 1040 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 DNPEPQ9ULA0 475 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 TPX2Q9ULW0 747 aaKnown RBP20.98■□□□□ 0.95
CD44-222ENST00000526025 SAR1BQ9Y6B6 198 aa20.98■□□□□ 0.95
CD44-222ENST00000526025 TNRC6BQ9UPQ9 1833 aaKnown RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 C10orf142B7Z368 130 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 PGRMC1O00264 195 aaKnown RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 TRAFD1O14545 582 aaPredicted RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 HTRA2O43464 458 aaPredicted RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 RNASEH2AO75792 299 aaKnown RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 STK10O94804 968 aaKnown RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 CA4P22748 312 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 NBL1P41271 181 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 NEK3P51956 506 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 METAP1P53582 386 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 CNTN1Q12860 1018 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 PIP5KL1Q5T9C9 394 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 COG1Q8WTW3 980 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 RLN3Q8WXF3 142 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 RTP4Q96DX8 246 aa20.97■□□□□ 0.95
CD44-222ENST00000526025 IMP4Q96G21 291 aaKnown RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 TOE1Q96GM8 510 aaKnown RBP20.97■□□□□ 0.95
CD44-222ENST00000526025 KLHL32Q96NJ5 620 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms