RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 DRD3P35462 400 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CSNK1DP48730 415 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 NR2C2P49116 596 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SCNN1BP51168 640 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 AFF3P51826 1226 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 C21orf59P57076 290 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 POLR2LP62875 67 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 RPS21P63220 83 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 GBE1Q04446 702 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 NSUN2Q08J23 767 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ELP6Q0PNE2 266 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 AP1B1Q10567 949 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SGCGQ13326 291 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 HNRNPDQ14103 355 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CYTH1Q15438 398 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCDC6Q16204 474 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 PPP2R5EQ16537 467 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 TRIM61Q5EBN2 209 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 RALGPS1Q5JS13 557 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 AGBL4Q5VU57 503 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC9A4Q6AI14 798 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 KIAA1161Q6NSJ0 714 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 NEK5Q6P3R8 708 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 BRAT1Q6PJG6 821 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 IL27RAQ6UWB1 636 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARHGAP36Q6ZRI8 547 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 PRR23CQ6ZRP0 262 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 PARS2Q7L3T8 475 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SRLQ86TD4 932 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 TTC7BQ86TV6 843 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC41A1Q8IVJ1 513 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCDC13Q8IYE1 715 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 NDUFAF2Q8N183 169 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZCCHC9Q8N567 271 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 DCLK2Q8N568 766 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 NETO2Q8NC67 525 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 TSEN2Q8NCE0 465 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 HCAR2Q8TDS4 363 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CXorf40AQ8TE69 158 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 P3H4Q92791 437 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 FATE1Q969F0 183 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 HAUS1Q96CS2 278 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 HDAC11Q96DB2 347 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 KLHL32Q96NJ5 620 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 TSGA13Q96PP4 275 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 PSKH2Q96QS6 385 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 EDEM2Q9BV94 578 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 CPEB1Q9BZB8 566 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZDHHC5Q9C0B5 715 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 POLR1EQ9GZS1 481 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 LACRTQ9GZZ8 138 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 GOLPH3Q9H4A6 298 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 C6orf106Q9H6K1 298 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 NT5MQ9NPB1 228 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 LZTFL1Q9NQ48 299 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 AASDHPPTQ9NRN7 309 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ETNK2Q9NVF9 386 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 DTLQ9NZJ0 730 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SEPT10Q9P0V9 454 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 DKK3Q9UBP4 350 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 LHX3Q9UBR4 397 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SERGEFQ9UGK8 458 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 AMACRQ9UHK6 382 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 EIF2B4Q9UI10 523 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 PILRBQ9UKJ0 227 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SARDHQ9UL12 918 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC6A14Q9UN76 642 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 TFR2Q9UP52 801 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 DMTF1Q9Y222 760 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 REXO2Q9Y3B8 237 aaKnown RBP5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 MFHAS1Q9Y4C4 1052 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 PCDHA3Q9Y5H8 950 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ACTL7AQ9Y615 435 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 ADGRG1Q9Y653 693 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 WASF2Q9Y6W5 498 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 DUSP10Q9Y6W6 482 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 MYOFQ9NZM1 2061 aa5.47□□□□□ -1.53
HMGB1P40-201ENST00000525121 hCG_1818297A0A087WSY0 165 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 A0A1W2PPC4 97 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 A0A1W2PQU0 124 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 C3orf70A6NLC5 250 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 UPK3BL1B0FP48 263 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 UPK3BL2E5RIL1 263 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PRAMEF26H0Y7S4 382 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PLK4O00444 970 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 MATN3O15232 486 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 AP1G1O43747 822 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 RNGTTO60942 597 aaKnown RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 SOCS5O75159 536 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 ZNF821O75541 412 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 MAP3K6O95382 1288 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 PIGNO95427 931 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CER1O95813 267 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 FTCDO95954 541 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CD160O95971 181 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CPP00450 1065 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 CCNB1P14635 433 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 IL4RP24394 825 aa5.46□□□□□ -1.54
HMGB1P40-201ENST00000525121 MAOBP27338 520 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms