RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 ELF1P32519 619 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 SLC26A3P40879 764 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 EPHB3P54753 998 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 OXCT1P55809 520 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 GNA12Q03113 381 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 ACVR1Q04771 509 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 ZBTB16Q05516 673 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 SLC12A1Q13621 1099 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 SEPT6Q14141 434 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 POU6F1Q14863 301 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 KRT72Q14CN4 511 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 PCLAFQ15004 111 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 SPRED3Q2MJR0 410 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 PABPC1LQ4VXU2 614 aaKnown RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 FASTKD1Q53R41 847 aaKnown RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 ALFQ53S48 1182 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 FAM133BQ5BKY9 247 aaKnown RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 TSTD2Q5T7W7 516 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 MBLAC2Q68D91 279 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 NADSYN1Q6IA69 706 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 FSTL4Q6MZW2 842 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 RTL10Q7L3V2 364 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 DEFB128Q7Z7B8 93 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 METTL3Q86U44 580 aaKnown RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 ZNF354CQ86Y25 554 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.54□□□□□ -1.2
CASP4-204ENST00000524843 HJURPQ8NCD3 748 aaPredicted RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 SPATA22Q8NHS9 363 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 GIPC2Q8TF65 315 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 PTPRN2Q92932 1015 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 IGSF8Q969P0 613 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 ARMC5Q96C12 935 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 PABPC5Q96DU9 382 aaKnown RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 APOL2Q9BQE5 337 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 CLSTN3Q9BQT9 956 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 CINPQ9BW66 212 aaPredicted RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 TMEM120AQ9BXJ8 343 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 MFSD1Q9H3U5 465 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 CCSER2Q9H7U1 834 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 IARS2Q9NSE4 1012 aaKnown RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 MRGBPQ9NV56 204 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 TMEM39AQ9NV64 488 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 NDFIP2Q9NV92 336 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 DNAJC28Q9NX36 388 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 UBA2Q9UBT2 640 aaPredicted RBP7.54□□□□□ -1.2
CASP4-204ENST00000524843 TLK1Q9UKI8 766 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 EMCNQ9ULC0 261 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 ZNF510Q9Y2H8 683 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 SLC27A5Q9Y2P5 690 aa7.54□□□□□ -1.2
CASP4-204ENST00000524843 ANKRD36A6QL64 1941 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 HELZP42694 1942 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 A0A0G2JND7 137 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 LOC285095A0A1B0GVY8 99 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 FAM95CA0A1B0GW59 222 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CCDC189A1A4V9 331 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 NT5C1B-RDH14C9J2C7 533 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ANKRD65E5RJM6 399 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 COCHO43405 550 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 SOAT2O75908 522 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 STC2O76061 302 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CNTN5O94779 1100 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 NDST3O95803 873 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 OLFM2O95897 454 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 C2P06681 752 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 MYL2P10916 166 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 FGF3P11487 239 aaPredicted RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 STMN1P16949 149 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CALB2P22676 271 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CORO1AP31146 461 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 SLC8A1P32418 973 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CD86P42081 329 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ARCN1P48444 511 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 SLC12A2P55011 1212 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 RAB10P61026 200 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 WDR5P61964 334 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 USP10Q14694 798 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 ADGRF1Q5T601 910 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 LCE2DQ5TA82 110 aaPredicted RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 ZNF470Q6ECI4 717 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 NEPROQ6NW34 567 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 KLC3Q6P597 504 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CYB5D1Q6P9G0 228 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 FBXO46Q6PJ61 603 aaPredicted RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 ZYG11AQ6WRX3 759 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.53□□□□□ -1.2
CASP4-204ENST00000524843 CCDC149Q6ZUS6 474 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ASRGL1Q7L266 308 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CLNKQ7Z7G1 428 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ARID3BQ8IVW6 561 aaPredicted RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 UNC5BQ8IZJ1 945 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ARHGAP24Q8N264 748 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 TMEM199Q8N511 208 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CFAP61Q8NHU2 1237 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 ARRDC2Q8TBH0 407 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 PIWIL2Q8TC59 973 aaKnown RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 MAGEC3Q8TD91 643 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 USP13Q92995 863 aaPredicted RBP7.53□□□□□ -1.2
CASP4-204ENST00000524843 PSMG2Q969U7 264 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 MARVELD3Q96A59 401 aa7.53□□□□□ -1.2
CASP4-204ENST00000524843 CCDC126Q96EE4 140 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 207.3 ms