RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 SDK2Q58EX2 2172 aa11.83□□□□□ -0.52
SDCBP-211ENST00000523441 LRP4O75096 1905 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 C16orf96A6NNT2 1141 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 KRIT1O00522 736 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 NVLO15381 856 aaKnown RBP11.82□□□□□ -0.52
SDCBP-211ENST00000523441 MYL1P05976 194 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
SDCBP-211ENST00000523441 CMA1P23946 247 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 PRCPP42785 496 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 POLE2P56282 527 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 PFN3P60673 137 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 CCDC40Q4G0X9 1142 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 CARD16Q5EG05 197 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 BORAQ6PGQ7 559 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 ENPP7Q6UWV6 458 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 CCNJLQ8IV13 435 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 NETO2Q8NC67 525 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 C1QTNF2Q9BXJ5 285 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 SLC4A5Q9BY07 1137 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 TKTL2Q9H0I9 626 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 SUDS3Q9H7L9 328 aaPredicted RBP11.82□□□□□ -0.52
SDCBP-211ENST00000523441 ATP13A1Q9HD20 1204 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 HECAQ9UBI9 543 aaPredicted RBP11.82□□□□□ -0.52
SDCBP-211ENST00000523441 RCOR1Q9UKL0 485 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 TBC1D30Q9Y2I9 924 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 COQ6Q9Y2Z9 468 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 DAAM1Q9Y4D1 1078 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 RNF215Q9Y6U7 377 aa11.82□□□□□ -0.52
SDCBP-211ENST00000523441 USP9YO00507 2555 aaPredicted RBP11.81□□□□□ -0.52
SDCBP-211ENST00000523441 NBPF19A0A087WUL8 3843 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 C9orf172C9J069 976 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 TMX2-CTNND1H3BSU7 103 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 SLC16A3O15427 465 aaKnown RBP11.81□□□□□ -0.52
SDCBP-211ENST00000523441 ZNF821O75541 412 aaPredicted RBP11.81□□□□□ -0.52
SDCBP-211ENST00000523441 UGT2B4P06133 528 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 PRKAR1AP10644 381 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 TFE3P19532 575 aaPredicted RBP11.81□□□□□ -0.52
SDCBP-211ENST00000523441 GNA15P30679 374 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 OR1E1P30953 314 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 FOXK1P85037 733 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 PDCLQ13371 301 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 PNOCQ13519 176 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 ELOCQ15369 112 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 AMZ1Q400G9 498 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 MAP9Q49MG5 647 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 ISM2Q6H9L7 571 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 KRBA2Q6ZNG9 492 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 FAM183BPQ6ZVS7 135 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 DRC7Q8IY82 874 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 IL22RA1Q8N6P7 574 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 DCAF4L2Q8NA75 395 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 RCBTB1Q8NDN9 531 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 KREMEN1Q96MU8 473 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 KLHL32Q96NJ5 620 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 LENG8Q96PV6 779 aaPredicted RBP11.81□□□□□ -0.52
SDCBP-211ENST00000523441 EPAS1Q99814 870 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 SEMA6CQ9H3T2 930 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 RDH14Q9HBH5 336 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 METTL14Q9HCE5 456 aaKnown RBP11.81□□□□□ -0.52
SDCBP-211ENST00000523441 ANLNQ9NQW6 1124 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 HPSEQ9Y251 543 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 DOCK4Q8N1I0 1966 aa11.81□□□□□ -0.52
SDCBP-211ENST00000523441 UNC79Q9P2D8 2635 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 B4DGG1 531 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 MED7O43513 233 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 TSPAN6O43657 245 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 ALPIP09923 528 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 CCL4P13236 92 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 CCKBRP32239 447 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 PPM1FP49593 454 aaPredicted RBP11.8□□□□□ -0.52
SDCBP-211ENST00000523441 SULT1E1P49888 294 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 SERPINH1P50454 418 aaKnown RBP11.8□□□□□ -0.52
SDCBP-211ENST00000523441 CLCN6P51797 869 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 FKBP3Q00688 224 aaKnown RBP11.8□□□□□ -0.52
SDCBP-211ENST00000523441 MORC3Q14149 939 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 IRF4Q15306 451 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 ALG11Q2TAA5 492 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 LRRC31Q6UY01 552 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 MACC1Q6ZN28 852 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 BEND5Q7L4P6 421 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 TMPRSS9Q7Z410 1059 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 TTC7BQ86TV6 843 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 GKN2Q86XP6 184 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 FAM26EQ8N5C1 309 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 CXorf40AQ8TE69 158 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 ZNF606Q8WXB4 792 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 PMEPA1Q969W9 287 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 CENPTQ96BT3 561 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 CPXM1Q96SM3 734 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 CMKLR1Q99788 373 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 EDEM3Q9BZQ6 932 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 WDCPQ9H6R7 721 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 SYNCQ9H7C4 482 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 PIGVQ9NUD9 493 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 MOSPD1Q9UJG1 213 aa11.8□□□□□ -0.52
SDCBP-211ENST00000523441 AP1G1O43747 822 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 HSF2BPO75031 334 aa11.79□□□□□ -0.52
SDCBP-211ENST00000523441 TM7SF2O76062 418 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms