RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ACTRT2Q8TDY3 377 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 RCN3Q96D15 328 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 SPAG4Q9NPE6 437 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 KRT84Q9NSB2 600 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 PNPOQ9NVS9 261 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 ZMYM5Q9UJ78 669 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 PRPF19Q9UMS4 504 aaKnown RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 DHX15O43143 795 aaKnown RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 ZNF862O60290 1169 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 OCM2P0CE71 109 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 OCMP0CE72 109 aaPredicted RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 HSMCR30P0CW71 290 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 AKR1A1P14550 325 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 KLF1Q13351 362 aaPredicted RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 ANO7Q6IWH7 933 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 PLEKHM3Q6ZWE6 761 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 LRRC49Q8IUZ0 686 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 GPC2Q8N158 579 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 UTP15Q8TED0 518 aaKnown RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 CDH19Q9H159 772 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 ZNF112Q9UJU3 913 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 TPRKBQ9Y3C4 175 aa13.95□□□□□ -0.18
SYNPO-205ENST00000522122 TNPO3Q9Y5L0 923 aaKnown RBP13.95□□□□□ -0.18
SYNPO-205ENST00000522122 IRF6O14896 467 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 URODP06132 367 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 ARF4P18085 180 aaPredicted RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 KRT20P35900 424 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 SCNN1GP51170 649 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 EPHB3P54753 998 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 GPX6P59796 221 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 FOLH1Q04609 750 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 USP4Q13107 963 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 DCTN2Q13561 401 aaKnown RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 ASRGL1Q7L266 308 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 C11orf74Q86VG3 221 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 FAM228AQ86W67 206 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 SVOPQ8N4V2 548 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 PTCD3Q96EY7 689 aaKnown RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 CDH9Q9ULB4 789 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 MTF2Q9Y483 593 aaPredicted RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 MYH10P35580 1976 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 PCNAP12004 261 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 PIK3R1P27986 724 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 CD86P42081 329 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 MRPS5P82675 430 aaKnown RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 DGKZQ13574 1117 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 MOGSQ13724 837 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 MPP2Q14168 576 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 LCLAT1Q6UWP7 414 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 SIAH1Q8IUQ4 282 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 NKAPQ8N5F7 415 aaKnown RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 FAM45AQ8TCE6 357 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 SMPD4Q9NXE4 827 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 CLIC5Q9NZA1 410 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 DNAJB4Q9UDY4 337 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 IRS2Q9Y4H2 1338 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 RGS14O43566 566 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 S100A3P33764 101 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 GRM5P41594 1212 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 CTBP1Q13363 440 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 STRADAQ7RTN6 431 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 STK40Q8N2I9 435 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 TSPAN14Q8NG11 270 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 APOL4Q9BPW4 351 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 BUD23O43709 281 aaKnown RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 CYP2A7P20853 494 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 PRDX6P30041 224 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 NR1H2P55055 460 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 FSCN1Q16658 493 aaKnown RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 DDR2Q16832 855 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 CYP4Z1Q86W10 505 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 MCOLN3Q8TDD5 553 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 TRPC4APQ8TEL6 797 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 CLPTM1LQ96KA5 538 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 MTIF3Q9H2K0 278 aaKnown RBP13.94□□□□□ -0.18
SYNPO-205ENST00000522122 OPTCQ9UBM4 332 aa13.94□□□□□ -0.18
SYNPO-205ENST00000522122 LINC00854A0A1B0GVQ3 168 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 FAM20BO75063 409 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 FARP2O94887 1054 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 STAU1O95793 577 aaKnown RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 CD48P09326 243 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 ATP1A4Q13733 1029 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 INSCQ1MX18 579 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TRAF7Q6Q0C0 670 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 PLD5Q8N7P1 536 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 MAGEE2Q8TD90 523 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 RERGLQ9H628 205 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 CYLDQ9NQC7 956 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 CDH22Q9UJ99 828 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 SCN7AQ01118 1682 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TRAFD1O14545 582 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 PAPSS1O43252 624 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 C2P06681 752 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 IMPDH2P12268 514 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 PBLDP30039 288 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 PIK3CGP48736 1102 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 ACBD5Q5T8D3 534 aaPredicted RBP13.93□□□□□ -0.18
SYNPO-205ENST00000522122 SLC39A4Q6P5W5 647 aa13.93□□□□□ -0.18
SYNPO-205ENST00000522122 TLDC1Q6P9B6 456 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms