RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SMC6Q96SB8 1091 aa22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 DONSONQ9NYP3 566 aa22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 TBC1D30Q9Y2I9 924 aa22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 NUP205Q92621 2012 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 SHISA7A6NL88 538 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 METTL18O95568 372 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 RHOCP08134 193 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 GSTA2P09210 222 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 STX2P32856 288 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 EIF2DP41214 584 aaKnown RBP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 MSH2P43246 934 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 MAGEA3P43357 314 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 SEMA5AQ13591 1074 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 EFTUD2Q15029 972 aaKnown RBP eCLIP22.4■■□□□ 1.181e-6■■■□□ 17.6
PTP4A3-204ENST00000521578 PRKD1Q15139 912 aaPredicted RBP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 HEATR6Q6AI08 1181 aaKnown RBP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 AGGF1Q8N302 714 aaeCLIP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 NETO2Q8NC67 525 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 MZB1Q8WU39 189 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 HTR3CQ8WXA8 447 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 FAM3CQ92520 227 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 SAMD15Q9P1V8 674 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 KIAA1549LQ6ZVL6 1849 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 WASH4PA8MWX3 477 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 TCP11X1B4DZS4 312 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 DCLK1O15075 740 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 DCXO43602 365 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 ZNF189O75820 626 aaPredicted RBP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 APRTP07741 180 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 MZF1P28698 734 aaPredicted RBP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 MAGEA9P43362 315 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 MAPKAPK2P49137 400 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 GEN1Q17RS7 908 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 SFTPA1Q8IWL2 248 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 ZNF557Q8N988 423 aaPredicted RBP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 LRRN4Q8WUT4 740 aa22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 KIAA1522Q9P206 1035 aaPredicted RBP22.4■■□□□ 1.18
PTP4A3-204ENST00000521578 A0A0A0MRY4 1105 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 TCRBV9S1A1TA0A576 114 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 TYROBPO43914 113 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 MFSD11O43934 449 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 AVILO75366 819 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 KAT7O95251 611 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 ASMTLO95671 621 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 VAV1P15498 845 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 SERPINB6P35237 376 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 CSKP41240 450 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 WDR4P57081 412 aaKnown RBP22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 IL9RQ01113 521 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 PRKCQQ04759 706 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 MTM1Q13496 603 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 FAXCQ5TGI0 409 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 RNF219Q5W0B1 726 aaPredicted RBP22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 SETD3Q86TU7 594 aaPredicted RBP22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 PHTF2Q8N3S3 785 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 MSANTD3Q96H12 275 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 CELF6Q96J87 481 aaKnown RBP22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 LMLNQ96KR4 655 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 SPATA13Q96N96 652 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 MUC3BQ9H195 1237 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 RETREG1Q9H6L5 497 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 NDRG2Q9UN36 371 aaKnown RBP22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 SLC27A6Q9Y2P4 619 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 RAD54BQ9Y620 910 aa22.39■■□□□ 1.17
PTP4A3-204ENST00000521578 A0A0D9SEW6 157 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 A0A1W2PPM1 405 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 TBC1D3BA6NDS4 549 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 MAN2B1O00754 1011 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 PABPC1P11940 636 aaKnown RBP22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 FDFT1P37268 417 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 PDK1Q15118 436 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 ZNF852Q6ZMS4 543 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 TAX1BP1Q86VP1 789 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 NPWQ8N729 165 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 ANKS4BQ8N8V4 417 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 TERB1Q8NA31 727 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 SLC44A1Q8WWI5 657 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 EDAQ92838 391 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 NOL6Q9H6R4 1146 aaKnown RBP22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 MLXIPLQ9NP71 852 aa22.38■■□□□ 1.17
PTP4A3-204ENST00000521578 RAMP2O60895 175 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 SPAG7O75391 227 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 C1QAP02745 245 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 APODP05090 189 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 GRIA2P42262 883 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 CDK16Q00536 496 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 ANKRD20A2Q5SQ80 823 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 SYCP2LQ5T4T6 812 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 ANKRD20A1Q5TYW2 823 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 ANKRD20A3Q5VUR7 823 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 ZNF534Q76KX8 674 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 APCDD1Q8J025 514 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 OR7D4Q8NG98 312 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 GDAP1Q8TB36 358 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 MRRFQ96E11 262 aaKnown RBP22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 SHDQ96IW2 340 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 ELAC2Q9BQ52 826 aaKnown RBP22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 FERMT1Q9BQL6 677 aa22.37■■□□□ 1.17
PTP4A3-204ENST00000521578 FEM1AQ9BSK4 669 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms