RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SCN1AP35498 2009 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 OR6C75A6NL08 312 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 FYNP06241 537 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 SPATA31D3P0C874 917 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 FMO4P31512 558 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 TAS2R39P59534 338 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 CYLC2Q14093 348 aaPredicted RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 RBBP7Q16576 425 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 PREPLQ4J6C6 727 aaPredicted RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 HECTD3Q5T447 861 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 SPATA31D4Q6ZUB0 917 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 ANKS3Q6ZW76 656 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 IFNEQ86WN2 208 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 OR7D4Q8NG98 312 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 NAF1Q96HR8 494 aaKnown RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 SUDS3Q9H7L9 328 aaPredicted RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 SRRDQ9UH36 339 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 ATP6AP2A0A1C7CYW4 349 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 F8W8V4 182 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 H2AFYO75367 372 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 ATP6AP2O75787 350 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 DLDP09622 509 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 RHOQP17081 205 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 TFEBP19484 476 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 KPNA1P52294 538 aaPredicted RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 RHOAP61586 193 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 RIPK1Q13546 671 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 LAMB3Q13751 1172 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 INSCQ1MX18 579 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 ARL13AQ5H913 290 aaPredicted RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 RASIP1Q5U651 963 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 FBXL22Q6P050 247 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 GSTCDQ8NEC7 633 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 SPPL2BQ8TCT7 592 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 TBATAQ96M53 351 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 MLPHQ9BV36 600 aaPredicted RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 MRPL9Q9BYD2 267 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 CCSER2Q9H7U1 834 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 BPIFA1Q9NP55 256 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 CD274Q9NZQ7 290 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 TRPC5OSA6NMA1 111 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 CRTAMO95727 393 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 URODP06132 367 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 PAX3P23760 479 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 PTDSS1P48651 473 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 CDH13P55290 713 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 CDK18Q07002 472 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 LBRQ14739 615 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 PTRHD1Q6GMV3 140 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 LRRC8EQ6NSJ5 796 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 TTC9BQ8N6N2 239 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 PNPLA1Q8N8W4 532 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 PYDC1Q8WXC3 89 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.26□□□□□ -0.77
MCF2-209ENST00000520602 TMEM30AQ9NV96 361 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 HACD3Q9P035 362 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 SEPT3Q9UH03 358 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 LSM7Q9UK45 103 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 RNF112Q9ULX5 631 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 SH3BP1Q9Y3L3 701 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 TCAF1Q9Y4C2 921 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 NEMP2A6NFY4 417 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 HDAC3O15379 428 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 OAS1P00973 400 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 AHSGP02765 367 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 PYGLP06737 847 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 CHRNGP07510 517 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 ITGB6P18564 788 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 MSX2P35548 267 aaPredicted RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 PSEN1P49768 467 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 PKNOX1P55347 436 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 ADAM17P78536 824 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 BTG3Q14201 252 aaPredicted RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 GALNTL6Q49A17 601 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 KHDC1Q4VXA5 237 aaKnown RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 AGKQ53H12 422 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 LIPMQ5VYY2 423 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 SMYD5Q6GMV2 418 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 CNSTQ6PJW8 725 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 GLT6D1Q7Z4J2 308 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 LRRC49Q8IUZ0 686 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 FSTL5Q8N475 847 aaPredicted RBP10.26□□□□□ -0.77
MCF2-209ENST00000520602 PIP4K2CQ8TBX8 421 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 TUBGCP3Q96CW5 907 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 FCRL5Q96RD9 977 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 DHRS4Q9BTZ2 278 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 TM6SF2Q9BZW4 377 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 SLC25A51Q9H1U9 297 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 SMOC2Q9H3U7 446 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 CASS4Q9NQ75 786 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 LATS2Q9NRM7 1088 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 EURLQ9NYK6 297 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 PKP3Q9Y446 797 aa10.26□□□□□ -0.77
MCF2-209ENST00000520602 OR51F1A6NGY5 319 aa10.25□□□□□ -0.77
MCF2-209ENST00000520602 SIN3BO75182 1162 aa10.25□□□□□ -0.77
MCF2-209ENST00000520602 PSMG1O95456 288 aa10.25□□□□□ -0.77
MCF2-209ENST00000520602 ITGBL1O95965 494 aaPredicted RBP10.25□□□□□ -0.77
MCF2-209ENST00000520602 PPARGP37231 505 aaPredicted RBP10.25□□□□□ -0.77
MCF2-209ENST00000520602 ABL2P42684 1182 aa10.25□□□□□ -0.77
MCF2-209ENST00000520602 KCNQ1P51787 676 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms