RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 AVPR1AP37288 418 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 GEMIN4P57678 1058 aaKnown RBP4.73□□□□□ -1.65
SQLE-202ENST00000518604 NEXNQ0ZGT2 675 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 ETFDHQ16134 617 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 GSTA3Q16772 222 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 DCAF6Q58WW2 860 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 TMEM71Q6P5X7 295 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 CPLX2Q6PUV4 134 aaKnown RBP4.73□□□□□ -1.65
SQLE-202ENST00000518604 SLC16A12Q6ZSM3 486 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 TMTC3Q6ZXV5 915 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 MOB3CQ70IA8 216 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 C1QL2Q7Z5L3 287 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 TBC1D26Q86UD7 250 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 PIM3Q86V86 326 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 CADM3Q8N126 398 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 GABPB2Q8TAK5 448 aaPredicted RBP4.73□□□□□ -1.65
SQLE-202ENST00000518604 CEP76Q8TAP6 659 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 SLC35F5Q8WV83 523 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 KLHL15Q96M94 604 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 NLRP4Q96MN2 994 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 LBHD1Q9BQE6 289 aaPredicted RBP4.73□□□□□ -1.65
SQLE-202ENST00000518604 H2AFJQ9BTM1 129 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 SPRTNQ9H040 489 aaPredicted RBP4.73□□□□□ -1.65
SQLE-202ENST00000518604 SLC25A18Q9H1K4 315 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 CDT1Q9H211 546 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 PRKRIP1Q9H875 184 aaPredicted RBP4.73□□□□□ -1.65
SQLE-202ENST00000518604 SMC4Q9NTJ3 1288 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 C20orf141Q9NUB4 165 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 AASSQ9UDR5 926 aa4.73□□□□□ -1.65
SQLE-202ENST00000518604 TMEM272A0A1B0GTI8 110 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 SEC14L2O76054 403 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 SYF2O95926 243 aaKnown RBP4.72□□□□□ -1.65
SQLE-202ENST00000518604 FGF2P09038 288 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 POLD2P49005 469 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 CDH12P55289 794 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 RPL7AP62424 266 aaKnown RBP4.72□□□□□ -1.65
SQLE-202ENST00000518604 SIM2Q14190 667 aaPredicted RBP4.72□□□□□ -1.65
SQLE-202ENST00000518604 VEPH1Q14D04 833 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 TSTQ16762 297 aaKnown RBP4.72□□□□□ -1.65
SQLE-202ENST00000518604 DUSP6Q16828 381 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 EPHA10Q5JZY3 1008 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 HYIQ5T013 277 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 TXNDC8Q6A555 127 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 ZNF425Q6IV72 752 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 FAM180BQ6P0A1 224 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 C4orf50Q6ZRC1 276 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 C1orf122Q6ZSJ8 110 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 PATL1Q86TB9 770 aaKnown RBP4.72□□□□□ -1.65
SQLE-202ENST00000518604 GPAT4Q86UL3 456 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 DENND6AQ8IWF6 608 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 RASSF8Q8NHQ8 419 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 ETNPPLQ8TBG4 499 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 METTL6Q8TCB7 284 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 NEK9Q8TD19 979 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 UCMAQ8WVF2 138 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 VOPP1Q96AW1 172 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 HMCESQ96FZ2 354 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 SLC29A3Q9BZD2 475 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 ISCUQ9H1K1 167 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 FOXP1Q9H334 677 aaPredicted RBP4.72□□□□□ -1.65
SQLE-202ENST00000518604 MVB12BQ9H7P6 319 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 SIRT3Q9NTG7 399 aaPredicted RBP4.72□□□□□ -1.65
SQLE-202ENST00000518604 ANKRD10Q9NXR5 420 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 ELOVL5Q9NYP7 299 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 NCKIPSDQ9NZQ3 722 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 ORC3Q9UBD5 711 aaPredicted RBP4.72□□□□□ -1.65
SQLE-202ENST00000518604 PNMA2Q9UL42 364 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 A4GNTQ9UNA3 340 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 CARD8Q9Y2G2 431 aa4.72□□□□□ -1.65
SQLE-202ENST00000518604 TYW5A2RUC4 315 aaKnown RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 HMGB1P1B2RPK0 211 aaPredicted RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 SLC25A17O43808 307 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 CCNDBP1O95273 360 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 CLEC3BP05452 202 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 HOXB5P09067 269 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 ARSBP15848 533 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 BSGP35613 385 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 CASP2P42575 452 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 NR4A2P43354 598 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 HARS2P49590 506 aaKnown RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 CTCFP49711 727 aaPredicted RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 ZNF81P51508 661 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 EIF5P55010 431 aaKnown RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 ZP1P60852 638 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 FAM27E3Q08E93 113 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 PTGR1Q14914 329 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 CCNG2Q16589 344 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 WASHC2DQ5SRD0 308 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 SLC46A3Q7Z3Q1 461 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 TBC1D1Q86TI0 1168 aaPredicted RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 CCDC105Q8IYK2 499 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 ZNF548Q8NEK5 533 aaPredicted RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 ENGASEQ8NFI3 743 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 INPP5DQ92835 1189 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 SLC25A28Q96A46 364 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 TMEM18Q96B42 140 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 GFM1Q96RP9 751 aaKnown RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 USP44Q9H0E7 712 aa4.71□□□□□ -1.66
SQLE-202ENST00000518604 RANBP17Q9H2T7 1088 aaKnown RBP4.71□□□□□ -1.66
SQLE-202ENST00000518604 NDRG3Q9UGV2 375 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms