RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 DRG2P55039 364 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CDH12P55289 794 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 WNT3P56703 355 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SUMO2P61956 95 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LMO4P61968 165 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BTG1P62324 171 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GNB1P62873 340 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TUBA1BP68363 451 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TXNL4AP83876 142 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ARHGAP8P85298 464 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PURAQ00577 322 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SRSF1Q07955 248 aaKnown RBP eCLIP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DMPKQ09013 629 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TROAPQ12815 778 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CHAF1AQ13111 956 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DMP1Q13316 513 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GTF2H3Q13889 308 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RUNX2Q13950 521 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GBX1Q14549 363 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MTF1Q14872 753 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 POLD3Q15054 466 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZRSR1Q15695 479 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC18A3Q16572 532 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC5A9Q2M3M2 681 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MINDY4Q4G0A6 757 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC9B1Q4ZJI4 515 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ESCO2Q56NI9 601 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC45A4Q5BKX6 768 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FSCBQ5H9T9 825 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FFAR4Q5NUL3 377 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OTUD3Q5T2D3 398 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C10orf76Q5T2E6 689 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LRIF1Q5T3J3 769 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LCE1BQ5T7P3 118 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RNF187Q5TA31 235 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SFRP4Q6FHJ7 346 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ARMC6Q6NXE6 501 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ARHGAP11AQ6P4F7 1023 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM171BQ6P995 826 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AAGABQ6PD74 315 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SPSB3Q6PJ21 355 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM180AQ6UWF9 173 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PARM1Q6UWI2 310 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC36A4Q6YBV0 504 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF852Q6ZMS4 543 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 Q6ZRP5 223 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PTAR1Q7Z6K3 402 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MRPL10Q7Z7H8 261 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TRABD2AQ86V40 505 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZC3HC1Q86WB0 502 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CHD1LQ86WJ1 897 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HEATR4Q86WZ0 1026 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CHERPQ8IWX8 916 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 BEST3Q8N1M1 668 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CRYBG2Q8N1P7 616 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CLASRPQ8N2M8 674 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FBXL16Q8N461 479 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 OR2C3Q8N628 320 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MYCT1Q8N699 235 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF485Q8NCK3 441 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MAPK1IP1LQ8NDC0 245 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KLHL30-AS1Q8NEE0 82 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DBF4BQ8NFT6 615 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TRIM58Q8NG06 486 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PJA1Q8NG27 643 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RFWD2Q8NHY2 731 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 MBD3L2Q8NHZ7 208 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ELP5Q8TE02 316 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 GDPD5Q8WTR4 605 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF473Q8WTR7 871 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ABHD5Q8WTS1 349 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 AFG1LQ8WV93 481 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZFPM2Q8WW38 1151 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TANKQ92844 425 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TMEM18Q96B42 140 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TBC1D20Q96BZ9 403 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 RSPRY1Q96DX4 576 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 IQCDQ96DY2 449 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 P2RY11Q96G91 374 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 VPS50Q96JG6 964 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FAM84BQ96KN1 310 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TNIP3Q96KP6 325 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SNX27Q96L92 541 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 COG8Q96MW5 612 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 IL17FQ96PD4 163 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TRAPPC9Q96Q05 1148 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ARPC5LQ9BPX5 153 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 EIF2AK1Q9BQI3 630 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SRSF8Q9BRL6 282 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 WDR83Q9BRX9 315 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NTPCRQ9BSD7 190 aaKnown RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC25A33Q9BSK2 321 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HAUS8Q9BT25 410 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 FSD1Q9BTV5 496 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TUBB6Q9BUF5 446 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 POLR3CQ9BUI4 534 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DCLK3Q9C098 648 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 LRRC27Q9C0I9 530 aa0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TP63Q9H3D4 680 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KLHL31Q9H511 634 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms