RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 MYBL1P10243 752 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 IRF1P10914 325 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SCG2P13521 617 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 AKR1A1P14550 325 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ST6GAL1P15907 406 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ITGAXP20702 1163 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DRD4P21917 467 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CDAP32320 146 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GRIA3P42263 894 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PIK3CAP42336 1068 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LIG4P49917 911 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCT8P50990 548 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TAP1Q03518 808 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GRIK3Q13003 919 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PPP2R5CQ13362 524 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 USP39Q53GS9 565 aaKnown RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZNF628Q5EBL2 1059 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TCP11X2Q5H9J9 407 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CXorf66Q5JRM2 361 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C9orf152Q5JTZ5 239 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KRBOX4Q5JUW0 171 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C10orf76Q5T2E6 689 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ABHD17BQ5VST6 288 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 JADE1Q6IE81 842 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KCNV1Q6PIU1 500 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DCLRE1AQ6PJP8 1040 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GET4Q7L5D6 327 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 LURAP1LQ8IV03 231 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PAQR4Q8N4S7 273 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 POU5F2Q8N7G0 328 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 AMER2Q8N7J2 671 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SYT2Q8N9I0 419 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SH3RF3Q8TEJ3 882 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FAR1Q8WVX9 515 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NEU4Q8WWR8 484 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZNF653Q96CK0 615 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RMDN1Q96DB5 314 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FIZ1Q96SL8 496 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MLST8Q9BVC4 326 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GATA5Q9BWX5 397 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FAM129AQ9BZQ8 928 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TKTL2Q9H0I9 626 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ST6GALNAC4Q9H4F1 302 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RANGRFQ9HD47 186 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 WSB2Q9NYS7 404 aaPredicted RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GRHL1Q9NZI5 618 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TFCP2L1Q9NZI6 479 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SEC63Q9UGP8 760 aaKnown RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ANAPC5Q9UJX4 755 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PPIEQ9UNP9 301 aaKnown RBP3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FAM96BQ9Y3D0 163 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCL27Q9Y4X3 112 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FLT1P17948 1338 aa3.4□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CYP2D7A0A087X1C5 515 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMEM247A6NEH6 219 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TRIM64A6NGJ6 449 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TRIM64BA6NI03 449 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SMTNL1A8MU46 457 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 H0Y626 953 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TAF4O00268 1085 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PAPSS1O43252 624 aaPredicted RBP3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MSI1O43347 362 aaKnown RBP3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 NDUFS3O75489 264 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SLC25A12O75746 678 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C22orf31O95567 290 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ABCB1P08183 1280 aaPredicted RBP3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SRPRAP08240 638 aaKnown RBP3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 C6P13671 934 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 IFNAR1P17181 557 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 KLRC2P26717 231 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 PON1P27169 355 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TLX1P31314 330 aaPredicted RBP3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MSH2P43246 934 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GABRB2P47870 512 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SOX2P48431 317 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MRPS35P82673 323 aaKnown RBP3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RBP5P82980 135 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 SLC18A2Q05940 514 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 DDR1Q08345 913 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TFCP2Q12800 502 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 MTA1Q13330 715 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 OLIG2Q13516 323 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 GALNT3Q14435 633 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HIST2H2ACQ16777 129 aaPredicted RBP3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 ZNF805Q5CZA5 627 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 IGSF11Q5DX21 431 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TMEM268Q5VZI3 342 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TBC1D9BQ66K14 1250 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HIST2H2BCQ6DN03 193 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 HIST2H2BDQ6DRA6 164 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FBXO42Q6P3S6 717 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 VSTM1Q6UX27 236 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 TRIM72Q6ZMU5 477 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CFAP77Q6ZQR2 320 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 FAM43BQ6ZT52 329 aaPredicted RBP3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RHOUQ7L0Q8 258 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 WDR5BQ86VZ2 330 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC25Q86WR0 208 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 RASAL3Q86YV0 1011 aa3.39□□□□□ -1.87
SCARNA15.2-201ENST00000516409 CCDC13Q8IYE1 715 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms