RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 ZFYVE27Q5T4F4 411 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 AGBL4Q5VU57 503 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 KIAA0895LQ68EN5 471 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 TXNRD3NBQ6F5E7 133 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 RAD9BQ6WBX8 426 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 DPY19L3Q6ZPD9 716 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 BZW1Q7L1Q6 419 aaKnown RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 KIAA1328Q86T90 577 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 TRIM69Q86WT6 500 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 CACUL1Q86Y37 369 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 SLC41A1Q8IVJ1 513 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 TMEFF1Q8IYR6 380 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 SYCE1Q8N0S2 351 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ATPAF2Q8N5M1 289 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 AADATQ8N5Z0 425 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 SPC24Q8NBT2 197 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 NETO1Q8TDF5 533 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 GANCQ8TET4 914 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 SKA1Q96BD8 255 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 RBM41Q96IZ5 413 aaKnown RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ZNF641Q96N77 438 aaPredicted RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 RNF157Q96PX1 679 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 PSKH2Q96QS6 385 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 CITED4Q96RK1 184 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 CINPQ9BW66 212 aaPredicted RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 NUSAP1Q9BXS6 441 aaKnown RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 BRD8Q9H0E9 1235 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 NEUROG2Q9H2A3 272 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 MTG2Q9H4K7 406 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 CD93Q9NPY3 652 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 HECAQ9UBI9 543 aaPredicted RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 DKK3Q9UBP4 350 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 SEPT3Q9UH03 358 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 IPO11Q9UI26 975 aaKnown RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 DMTF1Q9Y222 760 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 INVSQ9Y283 1065 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 EFR3BQ9Y2G0 817 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 FCF1Q9Y324 198 aaKnown RBP8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ALG6Q9Y672 507 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 WASF2Q9Y6W5 498 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 SDK1Q7Z5N4 2213 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ADAMTS9Q9P2N4 1935 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ZNF292O60281 2723 aa8.31□□□□□ -1.08
NEDD4-210ENST00000513957 ZFHX2Q9C0A1 2572 aaPredicted RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 PTPRZ1P23471 2315 aaPredicted RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 CCDC66A2RUB6 948 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 LRRD1A4D1F6 860 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 TMEM110-MUSTN1A8MSY1 372 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 KPNA3O00505 521 aaPredicted RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 KRT86O43790 486 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 BUB1BO60566 1050 aaPredicted RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 MAFKO60675 156 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 RNGTTO60942 597 aaKnown RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 LEFTY1O75610 366 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 CTSLP07711 333 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 SYPP08247 313 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 SERPINF2P08697 491 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 COMTP21964 271 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 AMPD1P23109 780 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 CES1P23141 567 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 ITPKAP23677 461 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 NFKBIAP25963 317 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 GARSP41250 739 aaKnown RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 GRIA4P48058 902 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 NR2C2P49116 596 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 AFF3P51826 1226 aaKnown RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 COPS2P61201 443 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 AP1S1P61966 158 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 GALNT2Q10471 571 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 OVGP1Q12889 678 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 HNRNPDQ14103 355 aaKnown RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 TFDP2Q14188 446 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 TEAD4Q15561 434 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 PPP2R5EQ16537 467 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 TAZQ16635 292 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 MYLK3Q32MK0 819 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 PIP5KL1Q5T9C9 394 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 DCAF12L1Q5VU92 463 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 NCBP2-AS2Q69YL0 99 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 SLC9A4Q6AI14 798 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 KIAA1161Q6NSJ0 714 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 BRAT1Q6PJG6 821 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 IL27RAQ6UWB1 636 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 ERN2Q76MJ5 926 aaKnown RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 DAAM2Q86T65 1068 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 KATNAL2Q8IYT4 538 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 RNF10Q8N5U6 811 aaKnown RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 FRMD1Q8N878 549 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 OR14C36Q8NHC7 312 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 EXD1Q8NHP7 514 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 TPCN2Q8NHX9 752 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 PCDH19Q8TAB3 1148 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 PIGKQ92643 395 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 ANP32BQ92688 251 aaKnown RBP8.3□□□□□ -1.08
NEDD4-210ENST00000513957 COL26A1Q96A83 441 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 HDAC11Q96DB2 347 aa8.3□□□□□ -1.08
NEDD4-210ENST00000513957 CELF6Q96J87 481 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms