RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 TEX44Q53QW1 395 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 ZNF776Q68DI1 518 aaPredicted RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 NCEH1Q6PIU2 408 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 BZW1Q7L1Q6 419 aaKnown RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 KDELC2Q7Z4H8 507 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 LRRC49Q8IUZ0 686 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 HDDC3Q8N4P3 179 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 TTC13Q8NBP0 860 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 ARRDC2Q8TBH0 407 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 ACTRT1Q8TDG2 376 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 UBE2Q2Q8WVN8 375 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 CASKIN2Q8WXE0 1202 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 PRCCQ92733 491 aaPredicted RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 SIPA1Q96FS4 1042 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 CCDC114Q96M63 670 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 KLHL32Q96NJ5 620 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 RBM15Q96T37 977 aaKnown RBP eCLIP11.47□□□□□ -0.57
HTT-213ENST00000513806 GORASP1Q9BQQ3 440 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 KLHL8Q9P2G9 620 aaPredicted RBP11.47□□□□□ -0.57
HTT-213ENST00000513806 RAPGEFL1Q9UHV5 662 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 PPM1HQ9ULR3 514 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 ZNF148Q9UQR1 794 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 TRPM6Q9BX84 2022 aa11.47□□□□□ -0.57
HTT-213ENST00000513806 USP34Q70CQ2 3546 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 GON4LQ3T8J9 2241 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 A0A0U1RQS6 177 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 H0Y858 1186 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 CES2O00748 559 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 AXIN1O15169 862 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 POP4O95707 220 aaKnown RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 IFNB1P01574 187 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 SP9P0CG40 484 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 PRLRP16471 622 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 BCKDHBP21953 392 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 PSMB4P28070 264 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 DRD3P35462 400 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 SKOR1P84550 965 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 C2orf54Q08AI8 447 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 CNTN1Q12860 1018 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 ELAVL3Q14576 367 aaKnown RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 PCSK7Q16549 785 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 CCNG2Q16589 344 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 ANKRD20A2Q5SQ80 823 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 ANKRD20A1Q5TYW2 823 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 ANKRD20A3Q5VUR7 823 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 GDPD4Q6W3E5 623 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 PARS2Q7L3T8 475 aaKnown RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 PID1Q7Z2X4 250 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 PRPF39Q86UA1 669 aaKnown RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 RASSF3Q86WH2 238 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 KLHL7Q8IXQ5 586 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 PRSS33Q8NF86 280 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 GANCQ8TET4 914 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 PDCD6IPQ8WUM4 868 aaKnown RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 MAGOHBQ96A72 148 aaKnown RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 TEKT5Q96M29 485 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 NUDCD1Q96RS6 583 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 DDX47Q9H0S4 455 aaKnown RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 PABPC3Q9H361 631 aaKnown RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 GLOD4Q9HC38 313 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 GGT7Q9UJ14 662 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 TTC7AQ9ULT0 858 aaPredicted RBP11.46□□□□□ -0.57
HTT-213ENST00000513806 ITM2BQ9Y287 266 aa11.46□□□□□ -0.57
HTT-213ENST00000513806 TNRC6BQ9UPQ9 1833 aaKnown RBP11.46□□□□□ -0.58
HTT-213ENST00000513806 TP53BP1Q12888 1972 aaPredicted RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 PRR23AA6NEV1 266 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 A8MX80 341 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 RNASEH1O60930 286 aaKnown RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 PHF2O75151 1096 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 RNASEH2AO75792 299 aaKnown RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 ALDH1A2O94788 518 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 PAPSS2O95340 614 aaPredicted RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 METTL18O95568 372 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 DNTTP04053 509 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 PDHA1P08559 390 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 ACADMP11310 421 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 COILP38432 576 aaPredicted RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 ABL2P42684 1182 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 VPS41P49754 854 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 TPMTP51580 245 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 ZNF33AQ06730 810 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 E2F5Q15329 346 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 METTL3Q86U44 580 aaKnown RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 BBS5Q8N3I7 341 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 MAIP1Q8WWC4 291 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 FATE1Q969F0 183 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 NKD2Q969F2 451 aaPredicted RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 OXNAD1Q96HP4 312 aaPredicted RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 IER2Q9BTL4 223 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 MLPHQ9BV36 600 aaPredicted RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 POLR1EQ9GZS1 481 aaKnown RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 NEUROG2Q9H2A3 272 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 SUV39H2Q9H5I1 410 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 FBXL12Q9NXK8 326 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 RSPH14Q9UHP6 348 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 MBD1Q9UIS9 605 aaPredicted RBP11.45□□□□□ -0.58
HTT-213ENST00000513806 CHKBQ9Y259 395 aa11.45□□□□□ -0.58
HTT-213ENST00000513806 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms