RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ITGAVP06756 1048 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 PTPN3P26045 913 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 RBL1P28749 1068 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 AVPR2P30518 371 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 MAPK8P45983 427 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 CXCL12P48061 93 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 CSNK1DP48730 415 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 CCNHP51946 323 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 COPAP53621 1224 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 AP1S1P61966 158 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 RAD51Q06609 339 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 NSUN2Q08J23 767 aaKnown RBP eCLIP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 BYSLQ13895 437 aaKnown RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 CYTH1Q15438 398 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 OASLQ15646 514 aaKnown RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 CYP1B1Q16678 543 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 TEX44Q53QW1 395 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 TMEM31Q5JXX7 168 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 C9orf64Q5T6V5 341 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF776Q68DI1 518 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 KIAA1211LQ6NV74 962 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 DARS2Q6PI48 645 aaKnown RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 DPY19L3Q6ZPD9 716 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 RASSF3Q86WH2 238 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 CREG2Q8IUH2 290 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 STK40Q8N2I9 435 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 CAMKK1Q8N5S9 505 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 PRELID2Q8N945 189 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 DTWD2Q8NBA8 298 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 OR2A12Q8NGT7 310 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 KIF18AQ8NI77 898 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 LRRN4Q8WUT4 740 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 C1orf54Q8WWF1 131 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 ATG4AQ8WYN0 398 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF419Q96HQ0 510 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 LRIG1Q96JA1 1093 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 EXOC2Q96KP1 924 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 CAPZA3Q96KX2 299 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 HEPHQ9BQS7 1158 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 RSPH9Q9H1X1 276 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 NT5MQ9NPB1 228 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 PRMT8Q9NR22 394 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 RBM22Q9NW64 420 aaKnown RBP eCLIP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 SPATA6Q9NWH7 488 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 SEPT10Q9P0V9 454 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 KLHL8Q9P2G9 620 aaPredicted RBP7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 ATP8A1Q9Y2Q0 1164 aa7.69□□□□□ -1.18
HMGXB3-204ENST00000513318 SDK1Q7Z5N4 2213 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ESPNB1AK53 854 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 CCDC188H7C350 402 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 KRIT1O00522 736 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 MUSKO15146 869 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 OPHN1O60890 802 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 APBB3O95704 486 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 POP4O95707 220 aaKnown RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 JCHAINP01591 159 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 GABRG2P18507 467 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 CR2P20023 1033 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 CES1P23141 567 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 STIP1P31948 543 aaKnown RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 CHRNA3P32297 505 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ACTN2P35609 894 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 RGRP47804 291 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 FNTAP49354 379 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 SCNN1BP51168 640 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 MAXP61244 160 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 SATB1Q01826 763 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 LMNB2Q03252 620 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ZBTB16Q05516 673 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 CKAP4Q07065 602 aaKnown RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 WASHC5Q12768 1159 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TUBB2AQ13885 445 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 CST6Q15828 149 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 SLC14A2Q15849 920 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 P3H1Q32P28 736 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TTC31Q49AM3 519 aaPredicted RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ATXN7L2Q5T6C5 722 aaPredicted RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 FAM46CQ5VWP2 391 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ITPRIPL1Q6GPH6 555 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 LYPD8Q6UX82 237 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 B4GALNT4Q76KP1 1039 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TMPRSS6Q8IU80 811 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 C1orf210Q8IVY1 113 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF567Q8N184 647 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 PGBD5Q8N414 524 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 RYBPQ8N488 228 aaPredicted RBP7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TMIEQ8NEW7 156 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 MDGA1Q8NFP4 955 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 GRIN3AQ8TCU5 1115 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 HMGB4Q8WW32 186 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 ZNF592Q92610 1267 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 RTP4Q96DX8 246 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 PPP1R16AQ96I34 528 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 MRGPRX1Q96LB2 322 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 TEKT5Q96M29 485 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 SPATA13Q96N96 652 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 AGAP3Q96P47 875 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 HHIPQ96QV1 700 aa7.68□□□□□ -1.18
HMGXB3-204ENST00000513318 NUDCD1Q96RS6 583 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms