RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 CD52P31358 61 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 PPP3CCP48454 512 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 ZNF131P52739 623 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 AP2B1P63010 937 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 ZBED6P86452 979 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 NCBP1Q09161 790 aaKnown RBP5.24□□□□□ -1.57
NEK1-204ENST00000509912 MANEALQ5VSG8 457 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 TAF3Q5VWG9 929 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 TRIM68Q6AZZ1 485 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 KIAA1324Q6UXG2 1013 aaKnown RBP5.24□□□□□ -1.57
NEK1-204ENST00000509912 DTX1Q86Y01 620 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 CCDC105Q8IYK2 499 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 COLGALT2Q8IYK4 626 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 ERMNQ8TAM6 284 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 GTF3C6Q969F1 213 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 EXOC4Q96A65 974 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 IGSF21Q96ID5 467 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 ZSWIM1Q9BR11 485 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 VPS16Q9H269 839 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 PRMT8Q9NR22 394 aaPredicted RBP5.24□□□□□ -1.57
NEK1-204ENST00000509912 KRT84Q9NSB2 600 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 PCMTD2Q9NV79 361 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.24□□□□□ -1.57
NEK1-204ENST00000509912 GDE1Q9NZC3 331 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 MBD1Q9UIS9 605 aaPredicted RBP5.24□□□□□ -1.57
NEK1-204ENST00000509912 SORCS3Q9UPU3 1222 aa5.24□□□□□ -1.57
NEK1-204ENST00000509912 CSPG5O95196 566 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 FTH1P19P0C7X4 201 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 CYP11B2P19099 503 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 CD6P30203 668 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 ETV4P43268 484 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 INSM1Q01101 510 aaPredicted RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 AKAP17AQ02040 695 aaKnown RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 UBXN2BQ14CS0 331 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 NAB2Q15742 525 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 EMC10Q5UCC4 262 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 B3GNT8Q7Z7M8 397 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 DNAJB14Q8TBM8 379 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 PIBF1Q8WXW3 757 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 SNX27Q96L92 541 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 STRA6Q9BX79 667 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 CPEB1Q9BZB8 566 aaKnown RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 FAM49AQ9H0Q0 323 aaPredicted RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 SLC25A32Q9H2D1 315 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 AGO3Q9H9G7 860 aaKnown RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 WDR6Q9NNW5 1121 aaKnown RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 ST3GAL5Q9UNP4 418 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 USP15Q9Y4E8 981 aaPredicted RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 TECTAO75443 2155 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 ZNF503-AS2A6NEH8 195 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 CLCA1A8K7I4 914 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 RPP40O75818 363 aaKnown RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 HAUS5O94927 633 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 RTN3O95197 1032 aaPredicted RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 ACVR2AP27037 513 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 NRIP1P48552 1158 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 POLD2P49005 469 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 PDE6CP51160 858 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 PRKAG1P54619 331 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 YBX1P67809 324 aaKnown RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 TRPC3Q13507 836 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 C19orf54Q5BKX5 351 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 SPDYCQ5MJ68 293 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 NOTUMQ6P988 496 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 DCLRE1AQ6PJP8 1040 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 USP17L6PQ6QN14 398 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 ENOSF1Q7L5Y1 443 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 ADGRD2Q7Z7M1 963 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 C12orf56Q8IXR9 622 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 TMEFF1Q8IYR6 380 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 MARS2Q96GW9 593 aaKnown RBP5.23□□□□□ -1.57
NEK1-204ENST00000509912 RAB34Q9BZG1 259 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 NT5C3AQ9H0P0 336 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 MYO7AQ13402 2215 aa5.23□□□□□ -1.57
NEK1-204ENST00000509912 KLF18A0A0U1RQI7 1052 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 LOC102723971A0A1B0GUV8 181 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 AREL1O15033 823 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 CYP1A1P04798 512 aaPredicted RBP5.22□□□□□ -1.57
NEK1-204ENST00000509912 CLCN4P51793 760 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 DCAF7P61962 342 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 GPS1Q13098 491 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 GALNTL6Q49A17 601 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 PRR16Q569H4 304 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 SPOUT1Q5T280 376 aaKnown RBP5.22□□□□□ -1.57
NEK1-204ENST00000509912 CCDC60Q8IWA6 550 aaPredicted RBP5.22□□□□□ -1.57
NEK1-204ENST00000509912 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.22□□□□□ -1.57
NEK1-204ENST00000509912 CYP2W1Q8TAV3 490 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 MZB1Q8WU39 189 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 KLHL5Q96PQ7 755 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 RTKNQ9BST9 563 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 SLC6A17Q9H1V8 727 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 UNC45AQ9H3U1 944 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 TLE6Q9H808 572 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 SAYSD1Q9NPB0 183 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 MOCS1Q9NZB8 636 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 CFAP97Q9P2B7 532 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 FBXW11Q9UKB1 542 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 DNAJC16Q9Y2G8 782 aa5.22□□□□□ -1.57
NEK1-204ENST00000509912 EVPLQ92817 2033 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms