RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 TTC7BQ86TV6 843 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 TRIM69Q86WT6 500 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 HORMAD1Q86X24 394 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 PSTKQ8IV42 348 aaKnown RBP9.52□□□□□ -0.89
DDX41-209ENST00000508279 CNGA4Q8IV77 575 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 NPWQ8N729 165 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 CASKIN2Q8WXE0 1202 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 FEM1CQ96JP0 617 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 CALN1Q9BXU9 219 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 RBSNQ9H1K0 784 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 PCDH18Q9HCL0 1135 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 OSGEPQ9NPF4 335 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 ETNK2Q9NVF9 386 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 UVRAGQ9P2Y5 699 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 LHX3Q9UBR4 397 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 GGT7Q9UJ14 662 aa9.52□□□□□ -0.89
DDX41-209ENST00000508279 ZFR2Q9UPR6 939 aaKnown RBP9.52□□□□□ -0.89
DDX41-209ENST00000508279 A0A1W2PR77 199 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 PRAMEF26H0Y7S4 382 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 TLR4O00206 839 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 LATO43561 262 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 PAK4O96013 591 aaPredicted RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 CD48P09326 243 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 TMEM253P0C7T8 217 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 ITIH2P19823 946 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 SPINK2P20155 84 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 HNRNPA2B1P22626 353 aaKnown RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 AKT2P31751 481 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 ABL2P42684 1182 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 CTSKP43235 329 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 ZNF135P52742 658 aaPredicted RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 CLDN2P57739 230 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 SGCGQ13326 291 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 SLC14A1Q13336 389 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 SUZ12Q15022 739 aaKnown RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 TRIP6Q15654 476 aaKnown RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 ASTE1Q2TB18 679 aaPredicted RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 ZNF284Q2VY69 593 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 PIP4P1Q86T03 277 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 GATAD2AQ86YP4 633 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 ARHGAP12Q8IWW6 846 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 PLPP6Q8IY26 295 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 ATPAF2Q8N5M1 289 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 NIPA2Q8N8Q9 360 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 KCTD6Q8NC69 237 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 TSEN2Q8NCE0 465 aaKnown RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 SLC35G2Q8TBE7 412 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 TEKT4Q8WW24 435 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 FAM131CQ96AQ9 280 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 KLHDC7BQ96G42 594 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 CSPG4P5Q96PW8 444 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 OSBPL1AQ9BXW6 950 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 PDFQ9HBH1 243 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 GDF3Q9NR23 364 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 IPO11Q9UI26 975 aaKnown RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 TPX2Q9ULW0 747 aaKnown RBP9.51□□□□□ -0.89
DDX41-209ENST00000508279 NENFQ9UMX5 172 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 DMTF1Q9Y222 760 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 BTBD3Q9Y2F9 522 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 FADS3Q9Y5Q0 445 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 NCOR2Q9Y618 2525 aa9.51□□□□□ -0.89
DDX41-209ENST00000508279 CXorf51AA0A1B0GTR3 108 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 TTC24A2A3L6 582 aaPredicted RBP9.5□□□□□ -0.89
DDX41-209ENST00000508279 IGLON5A6NGN9 336 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 PROSCO94903 275 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 MAP3K6O95382 1288 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 TOP3BO95985 862 aaKnown RBP9.5□□□□□ -0.89
DDX41-209ENST00000508279 PRKCGP05129 697 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 ITGAVP06756 1048 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 THEGLP0DJG4 465 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 NUDT1P36639 197 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 RGRP47804 291 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 HCAR3P49019 387 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 SCNN1BP51168 640 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 TAS2R40P59535 323 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 RPS21P63220 83 aaKnown RBP9.5□□□□□ -0.89
DDX41-209ENST00000508279 SEMG2Q02383 582 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 IL10RBQ08334 325 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 TBX2Q13207 712 aaPredicted RBP9.5□□□□□ -0.89
DDX41-209ENST00000508279 ZNF235Q14590 738 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 ZNF423Q2M1K9 1284 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 ODF2Q5BJF6 829 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 KIAA1161Q6NSJ0 714 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 NEK5Q6P3R8 708 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 SARM1Q6SZW1 724 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 PTAR1Q7Z6K3 402 aaPredicted RBP9.5□□□□□ -0.89
DDX41-209ENST00000508279 SRLQ86TD4 932 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.5□□□□□ -0.89
DDX41-209ENST00000508279 LZTR1Q8N653 840 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 PNPLA1Q8N8W4 532 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 MFSD2AQ8NA29 543 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 SPDYE1Q8NFV5 336 aaPredicted RBP9.5□□□□□ -0.89
DDX41-209ENST00000508279 CXorf40AQ8TE69 158 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 NSMCE1Q8WV22 266 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 LRIG1Q96JA1 1093 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 ELF4Q99607 663 aaPredicted RBP9.5□□□□□ -0.89
DDX41-209ENST00000508279 WRAP53Q9BUR4 548 aaKnown RBP9.5□□□□□ -0.89
DDX41-209ENST00000508279 SLC17A9Q9BYT1 436 aa9.5□□□□□ -0.89
DDX41-209ENST00000508279 A0A1B0GTQ1 180 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms