RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 HMGCLP35914 325 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GPR3P46089 330 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PIP4K2AP48426 406 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CDK9P50750 372 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 RAD23BP54727 409 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GPR85P60893 370 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MXRA7P84157 204 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TEFQ10587 303 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 NMIQ13287 307 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MEA1Q16626 185 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CEP55Q53EZ4 464 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ZC3H12BQ5HYM0 836 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 VITQ6UXI7 678 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TMC5Q6UXY8 1006 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PRR23CQ6ZRP0 262 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 RASSF3Q86WH2 238 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 FITM2Q8N6M3 262 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 C7orf57Q8NEG2 295 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 DMBX1Q8NFW5 382 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GANCQ8TET4 914 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 FBLIM1Q8WUP2 373 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 HSPH1Q92598 858 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TCTN2Q96GX1 697 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 HES6Q96HZ4 224 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 BTN2A3PQ96KV6 586 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 BBS4Q96RK4 519 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MYOCQ99972 504 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 WDR18Q9BV38 432 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CCDC106Q9BWC9 280 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 NSRP1Q9H0G5 558 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 KLHL25Q9H0H3 589 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CUEDC2Q9H467 287 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GDE1Q9NZC3 331 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MFHAS1Q9Y4C4 1052 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MACROD2A1Z1Q3 448 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ASNA1O43681 348 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 SPOPO43791 374 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 OR6B1O95007 311 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 APOEP02649 317 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ASNSP08243 561 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PDHA1P08559 390 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ASPAP45381 313 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 KRT6CP48668 564 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TUFMP49411 452 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 EPHB4P54760 987 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 RPS8P62241 208 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 KRT85P78386 507 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CNTN2Q02246 1040 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF844Q08AG5 666 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 KLF1Q13351 362 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 EIF4EBP2Q13542 120 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 SELPLGQ14242 412 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GALNT3Q14435 633 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 LPIN1Q14693 890 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CFAP221Q4G0U5 840 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 IQCCQ4KMZ1 466 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TEX30Q5JUR7 227 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 SUSD1Q6UWL2 747 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 C4orf50Q6ZRC1 276 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CYB5R4Q7L1T6 521 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 KSR1Q8IVT5 923 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF276Q8N554 614 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MINDY2Q8NBR6 621 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 RBM15BQ8NDT2 890 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 NLGN2Q8NFZ4 835 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 OR1N1Q8NGS0 311 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PIGOQ8TEQ8 1089 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GRAMD1AQ96CP6 724 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MYRFLQ96LU7 910 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF512Q96ME7 567 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 HS6ST2Q96MM7 605 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ZMAT2Q96NC0 199 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 RAB17Q9H0T7 212 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 NUP62CLQ9H1M0 184 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 NEK6Q9HC98 313 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 GLRX2Q9NS18 164 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CTTNBP2NLQ9P2B4 639 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 UBA2Q9UBT2 640 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 AMACRQ9UHK6 382 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 CHMP2BQ9UQN3 213 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 APOBEC2Q9Y235 224 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PTPRDP23468 1912 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 BRCA2P51587 3418 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 IGLV3-22A0A075B6J6 115 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PQLC2LA1A4F0 135 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF98A6NK75 572 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 SPECC1L-ADORA2AF8WAN1 911 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 MSI1O43347 362 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 FAM189A1O60320 539 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 EXOC3O60645 756 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 FAM155BO75949 473 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 JUNP05412 331 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 C6orf222P0C671 652 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 NR1D1P20393 614 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 TCEA1P23193 301 aaKnown RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 PPARGP37231 505 aaPredicted RBP2.31□□□□□ -2.04
NEDD4-205ENST00000506154 BCL6P41182 706 aa2.31□□□□□ -2.04
NEDD4-205ENST00000506154 STAT5AP42229 794 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms