RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PEBP4Q96S96 227 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 PPP1R9BQ96SB3 815 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 FUCA2Q9BTY2 467 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 HDAC8Q9BY41 377 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 ZDHHC6Q9H6R6 413 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 PNMA8BQ9ULN7 279 aaPredicted RBP13.37□□□□□ -0.27
DDX41-204ENST00000504807 PAXBP1Q9Y5B6 917 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 FADS3Q9Y5Q0 445 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 POM121BA6NF01 834 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 LRRC53A6NM62 1247 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 TRIM38O00635 465 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 INSIG1O15503 277 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 RFPL3O75679 317 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 ITGAVP06756 1048 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 MYF5P13349 255 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 ADRB3P13945 408 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 ZNF143P52747 638 aaPredicted RBP13.36□□□□□ -0.27
DDX41-204ENST00000504807 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
DDX41-204ENST00000504807 ZNF542PQ5EBM4 170 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 C6orf132Q5T0Z8 1188 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 NYAP1Q6ZVC0 841 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 HORMAD1Q86X24 394 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 PCDH20Q8N6Y1 951 aaKnown RBP13.36□□□□□ -0.27
DDX41-204ENST00000504807 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 TBC1D31Q96DN5 1066 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 CNDP2Q96KP4 475 aaKnown RBP13.36□□□□□ -0.27
DDX41-204ENST00000504807 KLF6Q99612 283 aaPredicted RBP13.36□□□□□ -0.27
DDX41-204ENST00000504807 HEPHQ9BQS7 1158 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 SELENOOQ9BVL4 669 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 FAM117AQ9C073 453 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 CEP44Q9C0F1 390 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 ERVMER34-1Q9H9K5 563 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
DDX41-204ENST00000504807 SEPT11Q9NVA2 429 aaKnown RBP13.36□□□□□ -0.27
DDX41-204ENST00000504807 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 DMTF1Q9Y222 760 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 PCDHGA1Q9Y5H4 931 aa13.36□□□□□ -0.27
DDX41-204ENST00000504807 TMCO5BA8MYB1 307 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 PRAMEF26H0Y7S4 382 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 ENC1O14682 589 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 PRNPP04156 253 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 CALB1P05937 261 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 THEGLP0DJG4 465 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 GP1BBP13224 206 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 ITGB7P26010 798 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 L1CAMP32004 1257 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 MAPKAPK2P49137 400 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 UCNP55089 124 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 PROX2Q3B8N5 592 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 INAVAQ3KP66 663 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 SETMARQ53H47 684 aaPredicted RBP13.35□□□□□ -0.27
DDX41-204ENST00000504807 ACAD10Q6JQN1 1059 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 RETSATQ6NUM9 610 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 DNAJC24Q6P3W2 148 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 ZNF571Q7Z3V5 609 aaPredicted RBP13.35□□□□□ -0.27
DDX41-204ENST00000504807 ABI3BPQ7Z7G0 1075 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 SLFN11Q7Z7L1 901 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 RTL3Q8N8U3 475 aaKnown RBP13.35□□□□□ -0.27
DDX41-204ENST00000504807 HMCESQ96FZ2 354 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 NSMCE3Q96MG7 304 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 TTYH3Q9C0H2 523 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 GPR27Q9NS67 375 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 KCNK4Q9NYG8 393 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 HECAQ9UBI9 543 aaPredicted RBP13.35□□□□□ -0.27
DDX41-204ENST00000504807 KLF15Q9UIH9 416 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 DAAM1Q9Y4D1 1078 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 BOD1L1Q8NFC6 3051 aa13.35□□□□□ -0.27
DDX41-204ENST00000504807 ABCA12Q86UK0 2595 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 LY6G6EA0A0G2JKS1 128 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 CASC3O15234 703 aaKnown RBP13.34□□□□□ -0.27
DDX41-204ENST00000504807 KDELR3O43731 214 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 DFNA5O60443 496 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 RAMP2O60895 175 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 TMCC1O94876 653 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 PCDH8O95206 1070 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 LDOC1O95751 146 aaPredicted RBP13.34□□□□□ -0.27
DDX41-204ENST00000504807 PAK4O96013 591 aaPredicted RBP13.34□□□□□ -0.27
DDX41-204ENST00000504807 TPM2P07951 284 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 CDK11BP21127 795 aaKnown RBP13.34□□□□□ -0.27
DDX41-204ENST00000504807 NEK3P51956 506 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
DDX41-204ENST00000504807 MAMLD1Q13495 774 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 STAT4Q14765 748 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 IQCB1Q15051 598 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 ACBD5Q5T8D3 534 aaPredicted RBP13.34□□□□□ -0.27
DDX41-204ENST00000504807 KIAA1614Q5VZ46 1190 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 SCYL2Q6P3W7 929 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 ZNF574Q6ZN55 896 aaPredicted RBP13.34□□□□□ -0.27
DDX41-204ENST00000504807 IQCHQ86VS3 1027 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 TP53INP2Q8IXH6 220 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 KLHDC7BQ96G42 594 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.34□□□□□ -0.27
DDX41-204ENST00000504807 MAGEH1Q9H213 219 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 PDFQ9HBH1 243 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 LHX3Q9UBR4 397 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 U3KQA8 63 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 RELNP78509 3460 aa13.34□□□□□ -0.27
DDX41-204ENST00000504807 IGLON5A6NGN9 336 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 C16orf96A6NNT2 1141 aa13.33□□□□□ -0.28
DDX41-204ENST00000504807 J3KR12 359 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms