RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 USP38Q8NB14 1042 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 HDAC7Q8WUI4 952 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 GFM1Q96RP9 751 aaKnown RBP4.31□□□□□ -1.72
SUB1-204ENST00000504016 MPHOSPH8Q99549 860 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 EPHX3Q9H6B9 360 aa4.31□□□□□ -1.72
SUB1-204ENST00000504016 KRCC1Q9NPI7 259 aaPredicted RBP4.31□□□□□ -1.72
SUB1-204ENST00000504016 C17orf102A2RUQ5 167 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 PABPN1LA6NDY0 278 aaKnown RBP4.3□□□□□ -1.72
SUB1-204ENST00000504016 PLEKHD1A6NEE1 506 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 ERVV-2B6SEH9 535 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 INAFM1C9JVW0 142 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 NCAM2O15394 837 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 RNMTO43148 476 aaKnown RBP4.3□□□□□ -1.72
SUB1-204ENST00000504016 AGR2O95994 175 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 SERPINC1P01008 464 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 CHRM4P08173 479 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 ARSBP15848 533 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 CDH15P55291 814 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 EFR3AQ14156 821 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 RPE65Q16518 533 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 EDRF1Q3B7T1 1238 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 TMEM95Q3KNT9 176 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 PRAMEF19Q5SWL8 479 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 FNBP1LQ5T0N5 605 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 GFI1BQ5VTD9 330 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 IL20RBQ6UXL0 311 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 RBM23Q86U06 439 aaKnown RBP4.3□□□□□ -1.72
SUB1-204ENST00000504016 MON1AQ86VX9 555 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 CPXM2Q8N436 756 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 OR4N2Q8NGD1 307 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 LMO3Q8TAP4 145 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 GPT2Q8TD30 523 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 RAB40AQ8WXH6 277 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 NR4A3Q92570 626 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 ELP4Q96EB1 424 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 PHF21BQ96EK2 531 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 LBHD1Q9BQE6 289 aaPredicted RBP4.3□□□□□ -1.72
SUB1-204ENST00000504016 HEMGNQ9BXL5 484 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 NUF2Q9BZD4 464 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 NPFFR1Q9GZQ6 430 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 PLAC1Q9HBJ0 212 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 ENTPD7Q9NQZ7 604 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 TMEM160Q9NX00 188 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 C9orf78Q9NZ63 289 aaPredicted RBP4.3□□□□□ -1.72
SUB1-204ENST00000504016 PEMTQ9UBM1 199 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 SEL1LQ9UBV2 794 aa4.3□□□□□ -1.72
SUB1-204ENST00000504016 GAGE12JA6NER3 117 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 OR6C75A6NL08 312 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 RGS14O43566 566 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 LDB2O43679 373 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 ATP2C2O75185 946 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 CAMTA2O94983 1202 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 ENO3P13929 434 aaPredicted RBP4.29□□□□□ -1.72
SUB1-204ENST00000504016 EDN2P20800 178 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 PCYT1AP49585 367 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 GALNT2Q10471 571 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 TBL3Q12788 808 aaKnown RBP4.29□□□□□ -1.72
SUB1-204ENST00000504016 GPS2Q13227 327 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 TRPC3Q13507 836 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 DUSP6Q16828 381 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 ZNF667Q5HYK9 610 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 RETSATQ6NUM9 610 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 PRSS45Q7RTY3 260 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 ESX1Q8N693 406 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 PRR26Q8N8Z3 221 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 LSM14AQ8ND56 463 aaKnown RBP4.29□□□□□ -1.72
SUB1-204ENST00000504016 RFWD2Q8NHY2 731 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 TBC1D22AQ8WUA7 517 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 SLC35F5Q8WV83 523 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 PPM1EQ8WY54 764 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 USP13Q92995 863 aaPredicted RBP4.29□□□□□ -1.72
SUB1-204ENST00000504016 ZBTB10Q96DT7 871 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 ZNF333Q96JL9 665 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 YME1L1Q96TA2 773 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 TM6SF1Q9BZW5 370 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 DCLK3Q9C098 648 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 KLHL31Q9H511 634 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 C6orf106Q9H6K1 298 aaPredicted RBP4.29□□□□□ -1.72
SUB1-204ENST00000504016 MVB12BQ9H7P6 319 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 PLSCR4Q9NRQ2 329 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 IL1RAPL1Q9NZN1 696 aa4.29□□□□□ -1.72
SUB1-204ENST00000504016 CNOT7Q9UIV1 285 aaKnown RBP4.29□□□□□ -1.72
SUB1-204ENST00000504016 A0A096LPK6 155 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 TYW5A2RUC4 315 aaKnown RBP4.28□□□□□ -1.72
SUB1-204ENST00000504016 KDM4EB2RXH2 506 aaPredicted RBP4.28□□□□□ -1.72
SUB1-204ENST00000504016 MS4A18H0YCH9 400 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 EYA2O00167 538 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 GAS8-AS1O95177 125 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 LCATP04180 440 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 URODP06132 367 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 IFIT1P09914 478 aaKnown RBP4.28□□□□□ -1.72
SUB1-204ENST00000504016 RPP30P78346 268 aaKnown RBP4.28□□□□□ -1.72
SUB1-204ENST00000504016 SLC18A2Q05940 514 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.28□□□□□ -1.72
SUB1-204ENST00000504016 CRYZQ08257 329 aaKnown RBP4.28□□□□□ -1.72
SUB1-204ENST00000504016 RUNX2Q13950 521 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 MYBPC2Q14324 1141 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 HNF4GQ14541 408 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 IZUMO4Q1ZYL8 232 aa4.28□□□□□ -1.72
SUB1-204ENST00000504016 ZNF284Q2VY69 593 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms