RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 HLA-DQB2P05538 268 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 OXTRP30559 389 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 RAD51Q06609 339 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 ITKQ08881 620 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 PRKD1Q15139 912 aaPredicted RBP16.7■□□□□ 0.26
SCLT1-205ENST00000503401 NOMO1Q15155 1222 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 SEL1L2Q5TEA6 688 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 AGBL4Q5VU57 503 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 PMS2CLQ68D20 193 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 GDPD4Q6W3E5 623 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 BZW1Q7L1Q6 419 aaKnown RBP16.7■□□□□ 0.26
SCLT1-205ENST00000503401 PARS2Q7L3T8 475 aaKnown RBP16.7■□□□□ 0.26
SCLT1-205ENST00000503401 CAMK1DQ8IU85 385 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 BBS5Q8N3I7 341 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 SUMF1Q8NBK3 374 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 OR14C36Q8NHC7 312 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 TFB1MQ8WVM0 346 aaKnown RBP16.7■□□□□ 0.26
SCLT1-205ENST00000503401 DYRK4Q9NR20 520 aa16.7■□□□□ 0.26
SCLT1-205ENST00000503401 ARIH1Q9Y4X5 557 aaPredicted RBP16.7■□□□□ 0.26
SCLT1-205ENST00000503401 RALGAPA1Q6GYQ0 2036 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 PRR23AA6NEV1 266 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 NEBLO76041 1014 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 CR2P20023 1033 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 ITGB7P26010 798 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 PTGER3P43115 390 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 ADPRHP54922 357 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 NSUN2Q08J23 767 aaKnown RBP eCLIP16.69■□□□□ 0.26
SCLT1-205ENST00000503401 KLF1Q13351 362 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-205ENST00000503401 LRRC73Q5JTD7 316 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 PIP5KL1Q5T9C9 394 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 SLC36A4Q6YBV0 504 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 FATE1Q969F0 183 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 NKD2Q969F2 451 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-205ENST00000503401 PPP1R16AQ96I34 528 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 CPEB1Q9BZB8 566 aaKnown RBP16.69■□□□□ 0.26
SCLT1-205ENST00000503401 CARD9Q9H257 536 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 C6orf106Q9H6K1 298 aaPredicted RBP16.69■□□□□ 0.26
SCLT1-205ENST00000503401 NOD2Q9HC29 1040 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 SCUBE2Q9NQ36 999 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 FZD4Q9ULV1 537 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 R3HDM2Q9Y2K5 976 aaKnown RBP16.69■□□□□ 0.26
SCLT1-205ENST00000503401 JRKLQ9Y4A0 524 aa16.69■□□□□ 0.26
SCLT1-205ENST00000503401 TNRC6BQ9UPQ9 1833 aaKnown RBP16.69■□□□□ 0.26
SCLT1-205ENST00000503401 OTOGLQ3ZCN5 2332 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 C16orf96A6NNT2 1141 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 H7C0C1 242 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 SEMA4FO95754 770 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 ATP1A1P05023 1023 aaKnown RBP16.68■□□□□ 0.26
SCLT1-205ENST00000503401 HSPA9P38646 679 aaKnown RBP16.68■□□□□ 0.26
SCLT1-205ENST00000503401 ATP5OP48047 213 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 CSNK1DP48730 415 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 DHPSP49366 369 aaPredicted RBP16.68■□□□□ 0.26
SCLT1-205ENST00000503401 IFI35P80217 286 aaPredicted RBP16.68■□□□□ 0.26
SCLT1-205ENST00000503401 DSC2Q02487 901 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 ELF2Q15723 593 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 ZNF805Q5CZA5 627 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 NCEH1Q6PIU2 408 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 ERN2Q76MJ5 926 aaKnown RBP16.68■□□□□ 0.26
SCLT1-205ENST00000503401 LPCAT2Q7L5N7 544 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 SLC41A1Q8IVJ1 513 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 CNTD1Q8N815 330 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 LRIG1Q96JA1 1093 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 ZC3H10Q96K80 434 aaKnown RBP16.68■□□□□ 0.26
SCLT1-205ENST00000503401 HSPA12BQ96MM6 686 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 AGAP3Q96P47 875 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 QKIQ96PU8 341 aaKnown RBP eCLIP16.68■□□□□ 0.26
SCLT1-205ENST00000503401 IL12RB2Q99665 862 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 SEMA3CQ99985 751 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 OSBPL1AQ9BXW6 950 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 SGK2Q9HBY8 427 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 RAB23Q9ULC3 237 aa16.68■□□□□ 0.26
SCLT1-205ENST00000503401 EP300Q09472 2414 aaPredicted RBP16.67■□□□□ 0.26
SCLT1-205ENST00000503401 GOLGA6L9A6NEM1 432 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 LMNAP02545 664 aaKnown RBP16.67■□□□□ 0.26
SCLT1-205ENST00000503401 KCNA4P22459 653 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 TAS2R38P59533 333 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 EIF3EP60228 445 aaKnown RBP16.67■□□□□ 0.26
SCLT1-205ENST00000503401 ZNF33AQ06730 810 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 SFSWAPQ12872 951 aaKnown RBP16.67■□□□□ 0.26
SCLT1-205ENST00000503401 IHHQ14623 411 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 RIF1Q5UIP0 2472 aaKnown RBP16.67■□□□□ 0.26
SCLT1-205ENST00000503401 C11orf74Q86VG3 221 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 ZSWIM9Q86XI8 627 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 SLC13A5Q86YT5 568 aaPredicted RBP16.67■□□□□ 0.26
SCLT1-205ENST00000503401 UBE2Q2Q8WVN8 375 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 NUDCD1Q96RS6 583 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 HDAC8Q9BY41 377 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 POLR1EQ9GZS1 481 aaKnown RBP16.67■□□□□ 0.26
SCLT1-205ENST00000503401 BRD8Q9H0E9 1235 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 SUV39H2Q9H5I1 410 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 ATP13A3Q9H7F0 1226 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 PCDHGC4Q9Y5F7 938 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 CEP104O60308 925 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 RHOBTB1O94844 696 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 RBP3P10745 1247 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 ADRB3P13945 408 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 ITIH2P19823 946 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 PTPN3P26045 913 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 RBL1P28749 1068 aa16.67■□□□□ 0.26
SCLT1-205ENST00000503401 PI4KAP42356 2102 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms