RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 PITRM1Q5JRX3 1037 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 FAM78AQ5JUQ0 283 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 LY6G5CQ5SRR4 150 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 LGSNQ5TDP6 509 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 PDPK2PQ6A1A2 396 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 ADGRD1Q6QNK2 874 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 MARK2Q7KZI7 788 aaKnown RBP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 SLC26A11Q86WA9 606 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 TMEM25Q86YD3 366 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 ANKMY2Q8IV38 441 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 MFSD6LQ8IWD5 586 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 ETFBKMTQ8IXQ9 262 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 AGGF1Q8N302 714 aaeCLIP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 PGBD5Q8N414 524 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 TAB3Q8N5C8 712 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 PCDH20Q8N6Y1 951 aaKnown RBP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 C12orf76Q8N812 135 aaPredicted RBP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 PPHLN1Q8NEY8 458 aaKnown RBP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 SPATA22Q8NHS9 363 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 FAM76AQ8TAV0 307 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 RIN3Q8TB24 985 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 FBF1Q8TES7 1133 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 USP33Q8TEY7 942 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 SLC44A1Q8WWI5 657 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 ING5Q8WYH8 240 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 ELSPBP1Q96BH3 223 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 MSLNLQ96KJ4 702 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 ZSWIM3Q96MP5 696 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 TRIB3Q96RU7 358 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 SEMA3CQ99985 751 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 FICDQ9BVA6 458 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 ADGRE3Q9BY15 652 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 CNOT10Q9H9A5 744 aaKnown RBP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 ZFP14Q9HCL3 533 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 DNAJC17Q9NVM6 304 aaKnown RBP9.18□□□□□ -0.94
NR1I3-216ENST00000502848 HACD3Q9P035 362 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 EPS15L1Q9UBC2 864 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 LHX3Q9UBR4 397 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 SLC25A13Q9UJS0 675 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 SLC8A2Q9UPR5 921 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 TTLL3Q9Y4R7 772 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 MTCH2Q9Y6C9 303 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 IKBKGQ9Y6K9 419 aa9.18□□□□□ -0.94
NR1I3-216ENST00000502848 NEDD8-MDP1E9PL57 170 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SIN3BO75182 1162 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 IGSF6O95976 241 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 MT-CYBP00156 380 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 INHBAP08476 426 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 MGAT1P26572 445 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 HLA-FP30511 346 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SSTR1P30872 391 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 HADHAP40939 763 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 GRIA1P42261 906 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 MSH2P43246 934 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SLC18A1P54219 525 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SESN2P58004 480 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 DSC2Q02487 901 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 ACVR1Q04771 509 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 MGAT5Q09328 741 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 KIAA0930Q6ICG6 404 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 GPR153Q6NV75 609 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 CASC4Q6P4E1 433 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 PKN3Q6P5Z2 889 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 NCEH1Q6PIU2 408 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 KDM7AQ6ZMT4 941 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 TPGS1Q6ZTW0 290 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 KIAA0408Q6ZU52 694 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 GALNT7Q86SF2 657 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 IGDCC3Q8IVU1 814 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SUGP1Q8IWZ8 645 aaKnown RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 CPA6Q8N4T0 437 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SMRP1Q8NCR6 262 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 IPMKQ8NFU5 416 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 OR2W6PQ8NHA6 318 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 WFDC5Q8TCV5 224 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 NXPE3Q969Y0 559 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 ALKBH8Q96BT7 664 aaKnown RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SGSM3Q96HU1 749 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 LRIG1Q96JA1 1093 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 PAFAH2Q99487 392 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 FAM83CQ9BQN1 747 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 TDRD1Q9BXT4 1180 aaKnown RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 CPEB1Q9BZB8 566 aaKnown RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SMG9Q9H0W8 520 aaKnown RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 TRABDQ9H4I3 376 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 PLAC1Q9HBJ0 212 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SCUBE2Q9NQ36 999 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 SYBUQ9NX95 663 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 CLEC1BQ9P126 229 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 INTS6Q9UL03 887 aaKnown RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 COLQQ9Y215 455 aaPredicted RBP9.17□□□□□ -0.94
NR1I3-216ENST00000502848 TCAF1Q9Y4C2 921 aa9.17□□□□□ -0.94
NR1I3-216ENST00000502848 CHD7Q9P2D1 2997 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.16□□□□□ -0.94
NR1I3-216ENST00000502848 IQANK1A0A1B0GTG1 560 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 ZCWPW2A0A1B0GU75 182 aa9.16□□□□□ -0.94
NR1I3-216ENST00000502848 MROH6A6NGR9 719 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms