RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 NRG1Q02297 640 aaPredicted RBP12.22□□□□□ -0.45
CNOT4-211ENST00000498534 RAD51Q06609 339 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 CDKN3Q16667 212 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 CDO1Q16878 200 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 ISXQ2M1V0 245 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 TRNP1Q6NT89 227 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 EFL1Q7Z2Z2 1120 aaKnown RBP12.22□□□□□ -0.45
CNOT4-211ENST00000498534 ZNF605Q86T29 641 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 EMC1Q8N766 993 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 DENND6BQ8NEG7 585 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 OR2AP1Q8NGE2 309 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 LMX1AQ8TE12 382 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 RXFP2Q8WXD0 754 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 ARHGEF2Q92974 986 aaKnown RBP12.22□□□□□ -0.45
CNOT4-211ENST00000498534 HIC2Q96JB3 615 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 KLF6Q99612 283 aaPredicted RBP12.22□□□□□ -0.45
CNOT4-211ENST00000498534 C1QTNF7Q9BXJ2 289 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 NAA15Q9BXJ9 866 aaKnown RBP12.22□□□□□ -0.45
CNOT4-211ENST00000498534 DPH1Q9BZG8 443 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 METTL5Q9NRN9 209 aaKnown RBP12.22□□□□□ -0.45
CNOT4-211ENST00000498534 THSD1Q9NS62 852 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 GPR27Q9NS67 375 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 TMEM248Q9NWD8 314 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 SPASTQ9UBP0 616 aa12.22□□□□□ -0.45
CNOT4-211ENST00000498534 LY6G6EA0A0G2JKS1 128 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 ZSCAN5CA6NGD5 496 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-211ENST00000498534 F8VZ95 297 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 BUB1O43683 1085 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 RAMP2O60895 175 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 CD160O95971 181 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 GSRP00390 522 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 UGT2B4P06133 528 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 PLEKP08567 350 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-211ENST00000498534 MMP8P22894 467 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 EEF1GP26641 437 aaKnown RBP12.21□□□□□ -0.45
CNOT4-211ENST00000498534 GKP32189 559 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 PFN3P60673 137 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 YPEL5P62699 121 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 CDR2Q01850 454 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 NR0B2Q15466 257 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 CCDC14Q49A88 953 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 TAF1BQ53T94 588 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-211ENST00000498534 CT47A1Q5JQC4 288 aaPredicted RBP12.21□□□□□ -0.45
CNOT4-211ENST00000498534 ARTNQ5T4W7 220 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 FAXCQ5TGI0 409 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 GDPD4Q6W3E5 623 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 STRADAQ7RTN6 431 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 ZNF354CQ86Y25 554 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 OR6K2Q8NGY2 324 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 EPS8L1Q8TE68 723 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 KCNE4Q8WWG9 221 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 KLHL32Q96NJ5 620 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 SLC13A1Q9BZW2 595 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 CAAP1Q9H8G2 361 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 KLF15Q9UIH9 416 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 ACTL7AQ9Y615 435 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 U3KQA8 63 aa12.21□□□□□ -0.45
CNOT4-211ENST00000498534 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 TOR1BO14657 336 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 KLK10O43240 276 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 KDELR3O43731 214 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 TM7SF2O76062 418 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 GFPT2O94808 682 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 TPM2P07951 284 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 ANXA6P08133 673 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 KRT3P12035 628 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 TGM2P21980 687 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 ABL2P42684 1182 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 ADKP55263 362 aaKnown RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 FOXK1P85037 733 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 RHDQ02161 417 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 CFHR1Q03591 330 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 C15orf59Q2T9L4 293 aaPredicted RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 DPCR1Q3MIW9 517 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 PRRT3Q5FWE3 981 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 TCP11X2Q5H9J9 407 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 ESRP1Q6NXG1 681 aaKnown RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 GUSBP11Q6P575 273 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 TRIM72Q6ZMU5 477 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 LEKR1Q6ZMV7 388 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 RBM44Q6ZP01 1051 aaKnown RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 PHLDB2Q86SQ0 1253 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 VPS36Q86VN1 386 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 WDR48Q8TAF3 677 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 CXorf40AQ8TE69 158 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 SCG3Q8WXD2 468 aaKnown RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 CASKIN2Q8WXE0 1202 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 CENPTQ96BT3 561 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 TBC1D31Q96DN5 1066 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 CCDC97Q96F63 343 aaPredicted RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 GDAP1L1Q96MZ0 367 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 TTYH3Q9C0H2 523 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 CLSTN2Q9H4D0 955 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 SAMSN1Q9NSI8 373 aaKnown RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 NDFIP2Q9NV92 336 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 APOBEC3BQ9UH17 382 aaKnown RBP12.2□□□□□ -0.46
CNOT4-211ENST00000498534 MGAQ8IWI9 3026 aa12.2□□□□□ -0.46
CNOT4-211ENST00000498534 FLNBO75369 2602 aaKnown RBP12.19□□□□□ -0.46
CNOT4-211ENST00000498534 C2CD4BA6NLJ0 364 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms