RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 CLNKQ7Z7G1 428 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 FAM228AQ86W67 206 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 ECHDC2Q86YB7 292 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 ZNF280BQ86YH2 543 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 TMC8Q8IU68 726 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 MB21D2Q8IYB1 491 aaPredicted RBP4.27□□□□□ -1.73
USP54-217ENST00000498213 HACE1Q8IYU2 909 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 MIER2Q8N344 545 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 DCBLD1Q8N8Z6 715 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 IFI44Q8TCB0 444 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 OTUD7AQ8TE49 926 aaPredicted RBP4.27□□□□□ -1.73
USP54-217ENST00000498213 CRYGNQ8WXF5 182 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 KAT5Q92993 513 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 WBP1Q96G27 269 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 MSANTD3Q96H12 275 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 NAF1Q96HR8 494 aaKnown RBP4.27□□□□□ -1.73
USP54-217ENST00000498213 B3GALT6Q96L58 329 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 GCOM2Q9BZD3 368 aaPredicted RBP4.27□□□□□ -1.73
USP54-217ENST00000498213 ZMYND12Q9H0C1 365 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 UNKLQ9H9P5 680 aaKnown RBP4.27□□□□□ -1.73
USP54-217ENST00000498213 AGO4Q9HCK5 861 aaKnown RBP4.27□□□□□ -1.73
USP54-217ENST00000498213 C6orf50Q9HD87 102 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 ZNF302Q9NR11 478 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 SH3GLB2Q9NR46 395 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 ZDHHC7Q9NXF8 308 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 KCTD5Q9NXV2 234 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 MAFFQ9ULX9 164 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 NEU2Q9Y3R4 380 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 SPAG17Q6Q759 2223 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 CACNA1DQ01668 2161 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 NID2Q14112 1375 aa4.27□□□□□ -1.73
USP54-217ENST00000498213 PHLPP2Q6ZVD8 1323 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 IGKV6-21A0A0C4DH24 114 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 CCDC78A2IDD5 438 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 SH2B2O14492 632 aaPredicted RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 ZNF263O14978 683 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 TBX3O15119 743 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 DTNBO60941 627 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 ATP9AO75110 1047 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 AFPP02771 609 aaKnown RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 ATXN1LP0C7T5 689 aaKnown RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 DARSP14868 501 aaKnown RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 GCFC2P16383 781 aaKnown RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 CHMLP26374 656 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 CD38P28907 300 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 VIPR2P41587 438 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 IRX6P78412 446 aaPredicted RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 MRPS21P82921 87 aaKnown RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 ELAVL2Q12926 359 aaKnown RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 PCBP2Q15366 365 aaKnown RBP eCLIP4.26□□□□□ -1.73
USP54-217ENST00000498213 C3orf36Q3SXR2 165 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 PRR16Q569H4 304 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 XKR3Q5GH77 459 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 FAM78AQ5JUQ0 283 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 DGKKQ5KSL6 1271 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 TTC22Q5TAA0 569 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 PMS2CLQ68D20 193 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 USP17L6PQ6QN14 398 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 CYB5R4Q7L1T6 521 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 SRGAP1Q7Z6B7 1085 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 TTC7BQ86TV6 843 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 NAXDQ8IW45 347 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 MINDY1Q8N5J2 469 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 LINC01465Q8N7H1 131 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 URGCPQ8TCY9 931 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 TCP11Q8WWU5 503 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 NACC2Q96BF6 587 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 ELSPBP1Q96BH3 223 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 PCYT2Q99447 389 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 SPATA5L1Q9BVQ7 753 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 TLR10Q9BXR5 811 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 NFKBIZQ9BYH8 718 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 TPSD1Q9BZJ3 242 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 IMPG2Q9BZV3 1241 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 CPVLQ9H3G5 476 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 SYNPO2LQ9H987 977 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 PRDM16Q9HAZ2 1276 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 JKAMPQ9P055 326 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 CALCOCO1Q9P1Z2 691 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 FNIP2Q9P278 1114 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 HSFX1Q9UBD0 423 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 PLEKHB1Q9UF11 243 aaPredicted RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 LIMCH1Q9UPQ0 1083 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 CFAP20Q9Y6A4 193 aaKnown RBP4.26□□□□□ -1.73
USP54-217ENST00000498213 CSMD1Q96PZ7 3565 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 KAT6AQ92794 2004 aa4.26□□□□□ -1.73
USP54-217ENST00000498213 ATG2BQ96BY7 2078 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 IGLV3-22A0A075B6J6 115 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 SPECC1L-ADORA2AF8WAN1 911 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 MASP2O00187 686 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 GABRDO14764 452 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 PRC1O43663 620 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 PCDHGA12O60330 932 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 ALDH2P05091 517 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 HNRNPA1P09651 372 aaKnown RBP eCLIP4.25□□□□□ -1.73
USP54-217ENST00000498213 CEBPBP17676 345 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 SCP2P22307 547 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 PAX3P23760 479 aa4.25□□□□□ -1.73
USP54-217ENST00000498213 FCARP24071 287 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms