RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 PAK5Q9P286 719 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 BCCIPQ9P287 314 aaKnown RBP eCLIP13.74□□□□□ -0.21
CPNE1-227ENST00000498056 PCYOX1Q9UHG3 505 aa13.74□□□□□ -0.21
CPNE1-227ENST00000498056 A0A1W2PQF6 199 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 TARSL2A2RTX5 802 aaKnown RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 C1QTNF3-AMACRE9PGA6 284 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 KPNA3O00505 521 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 ALOX15BO15296 676 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 PI15O43692 258 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 RNASEH1O60930 286 aaKnown RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 GCATO75600 419 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 LEFTY1O75610 366 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SLC34A2O95436 690 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 MT-CYBP00156 380 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 IL1BP01584 269 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 PRNPP04156 253 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 UGT2B4P06133 528 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SERPINF2P08697 491 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 CR2P20023 1033 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SERPINA4P29622 427 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 MRPS25P82663 173 aaKnown RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 NIPAL4Q0D2K0 466 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 MTAPQ13126 283 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 PTK6Q13882 451 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 DHX34Q14147 1143 aaKnown RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 PRPSAP1Q14558 356 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SYCP2LQ5T4T6 812 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 ZNF776Q68DI1 518 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 ALG1LQ6GMV1 187 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 KIAA1324Q6UXG2 1013 aaKnown RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SYT13Q7L8C5 426 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 MMAAQ8IVH4 418 aaKnown RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 TSTD1Q8NFU3 115 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 OR2T3Q8NH03 318 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SPATA22Q8NHS9 363 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 PDCD6IPQ8WUM4 868 aaKnown RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 HMGB4Q8WW32 186 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 HEPHQ9BQS7 1158 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 IER2Q9BTL4 223 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 FSD1LQ9BXM9 530 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SLC25A51Q9H1U9 297 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SLC6A17Q9H1V8 727 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 EPHX3Q9H6B9 360 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 L2HGDHQ9H9P8 463 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 FBRSQ9HAH7 460 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 NOD2Q9HC29 1040 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 POLMQ9NP87 494 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 RAB6BQ9NRW1 208 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 SPATA6Q9NWH7 488 aaPredicted RBP13.73□□□□□ -0.21
CPNE1-227ENST00000498056 C2orf42Q9NWW7 574 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 UBP1Q9NZI7 540 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 WASF2Q9Y6W5 498 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 DOCK9Q9BZ29 2069 aa13.73□□□□□ -0.21
CPNE1-227ENST00000498056 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 E7EVH7 732 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 RAD51CO43502 376 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 PMPCBO75439 489 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 CTSLP07711 333 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 CA4P22748 312 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 RPL22P35268 128 aaKnown RBP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 PTGIRP43119 386 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 TNNT3P45378 269 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 CSNK1DP48730 415 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 LMAN1P49257 510 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 DGKEP52429 567 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 COPAP53621 1224 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 SATB1Q01826 763 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 BCL2L1Q07817 233 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 NSUN2Q08J23 767 aaKnown RBP eCLIP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 TRAF2Q12933 501 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 GPS1Q13098 491 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 CST6Q15828 149 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 MYLK3Q32MK0 819 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 ANO7Q6IWH7 933 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 NCEH1Q6PIU2 408 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 PGBD3Q8N328 593 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 SPEM1Q8N4L4 309 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 NOA1Q8NC60 698 aaKnown RBP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 IPMKQ8NFU5 416 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 ARRDC2Q8TBH0 407 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 PIP4K2CQ8TBX8 421 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 SLCO2A1Q92959 643 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 IMP4Q96G21 291 aaKnown RBP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 TUBGCP5Q96RT8 1024 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 TDRD1Q9BXT4 1180 aaKnown RBP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 TRIM31Q9BZY9 425 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 RSPH9Q9H1X1 276 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 DYRK4Q9NR20 520 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 FEZ2Q9UHY8 353 aaPredicted RBP13.72□□□□□ -0.21
CPNE1-227ENST00000498056 SPAG17Q6Q759 2223 aa13.72□□□□□ -0.21
CPNE1-227ENST00000498056 TRPM6Q9BX84 2022 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GOLGA6CA6NDK9 693 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 GOLGA6BA6NDN3 693 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 ANXA9O76027 345 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 METTL18O95568 372 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 POP4O95707 220 aaKnown RBP13.71□□□□□ -0.21
CPNE1-227ENST00000498056 ADH1BP00325 375 aa13.71□□□□□ -0.21
CPNE1-227ENST00000498056 CPP00450 1065 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms