RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SLC2A6Q9UGQ3 507 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 FBXO5Q9UKT4 447 aa11.2□□□□□ -0.62
CMSS1-208ENST00000496116 THSD7BQ9C0I4 1608 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 MYLKQ15746 1914 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 IGLV3-10A0A075B6K4 115 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 FAM92AA1XBS5 289 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 OR6C75A6NL08 312 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 E9PBE3 544 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 MATN2O00339 956 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 DCXO43602 365 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 KLHL41O60662 606 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 PEX11BO96011 259 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 COL6A1P12109 1028 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 USP46P62068 366 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 SLC25A3Q00325 362 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 MTA1Q13330 715 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 TRIP4Q15650 581 aaPredicted RBP11.19□□□□□ -0.62
CMSS1-208ENST00000496116 PSMD5Q16401 504 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 ACAD11Q709F0 780 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 TMC7Q7Z402 723 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF683Q8IZ20 524 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 SLC25A41Q8N5S1 370 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 AGR3Q8TD06 166 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 PDCD6IPQ8WUM4 868 aaKnown RBP11.19□□□□□ -0.62
CMSS1-208ENST00000496116 STON2Q8WXE9 905 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 LINC01599Q8WXQ3 324 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 HMCESQ96FZ2 354 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 CLPTM1LQ96KA5 538 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 PANX3Q96QZ0 392 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 MRPL57Q9BQC6 102 aaKnown RBP11.19□□□□□ -0.62
CMSS1-208ENST00000496116 MRPL46Q9H2W6 279 aaKnown RBP11.19□□□□□ -0.62
CMSS1-208ENST00000496116 GPAMQ9HCL2 828 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 NMRK1Q9NWW6 199 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 TMEM161AQ9NX61 479 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 IL37Q9NZH6 218 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 DNAJB4Q9UDY4 337 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 ARHGAP26Q9UNA1 814 aa11.19□□□□□ -0.62
CMSS1-208ENST00000496116 MRPL42Q9Y6G3 142 aaKnown RBP11.19□□□□□ -0.62
CMSS1-208ENST00000496116 A0A088AWK7 358 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 LIN7AO14910 233 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-208ENST00000496116 FKBP6O75344 327 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 PAPSS2O95340 614 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-208ENST00000496116 PIGNO95427 931 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 CHRNGP07510 517 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 SBK3P0C264 359 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 SERPINB5P36952 375 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 CD86P42081 329 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 CHRNA4P43681 627 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 NAGLUP54802 743 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 SP3Q02447 781 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 ARL13AQ5H913 290 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MAP3K21Q5TCX8 1036 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 FAM171A1Q5VUB5 890 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 TRIM68Q6AZZ1 485 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 TRAF7Q6Q0C0 670 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 CEP97Q8IW35 865 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 NXNL1Q96CM4 212 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 ATP13A1Q9HD20 1204 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MAN1C1Q9NR34 630 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.18□□□□□ -0.62
CMSS1-208ENST00000496116 RNF186Q9NXI6 227 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 NCKIPSDQ9NZQ3 722 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-208ENST00000496116 TARM1B6A8C7 271 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 J3KR12 359 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 RAMP2O60895 175 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 COX4I1P13073 169 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 CPB1P15086 417 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 TFEBP19484 476 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 GLDCP23378 1020 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MPSTP25325 297 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 LEPRP48357 1165 aaKnown RBP11.18□□□□□ -0.62
CMSS1-208ENST00000496116 CLCN5P51795 746 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 TAS2R39P59534 338 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MAXP61244 160 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 SLC10A7Q0GE19 358 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 SMARCB1Q12824 385 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF460Q14592 562 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MBTPS1Q14703 1052 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 POLD3Q15054 466 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-208ENST00000496116 FAM83EQ2M2I3 478 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 PARP15Q460N3 678 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 ALFQ53S48 1182 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 C10orf120Q5SQS8 335 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 TSTD2Q5T7W7 516 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 FBXL22Q6P050 247 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MIB1Q86YT6 1006 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MYLK4Q86YV6 388 aaPredicted RBP11.18□□□□□ -0.62
CMSS1-208ENST00000496116 TEX26Q8N6G2 289 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 ATAD1Q8NBU5 361 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 SPPL2BQ8TCT7 592 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MAPK15Q8TD08 544 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 ACTRT2Q8TDY3 377 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 TSPAN17Q96FV3 270 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 ZNF333Q96JL9 665 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 RTKNQ9BST9 563 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 MARCH2Q9P0N8 246 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 CDYLQ9Y232 598 aa11.18□□□□□ -0.62
CMSS1-208ENST00000496116 LOC100653049A0A140TA62 436 aa11.17□□□□□ -0.62
CMSS1-208ENST00000496116 SLC22A2O15244 555 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms