RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 GALNT15Q8N3T1 639 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 SNRNP25Q9BV90 132 aaKnown RBP24.58■■□□□ 1.53
HLA-C-209ENST00000495835 C1QTNF2Q9BXJ5 285 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 KLHL11Q9NVR0 708 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 DKK3Q9UBP4 350 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 LUC7L2Q9Y383 392 aaKnown RBP24.58■■□□□ 1.53
HLA-C-209ENST00000495835 WDFY3Q8IZQ1 3526 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 PTPRBP23467 1997 aa24.58■■□□□ 1.52
HLA-C-209ENST00000495835 DAPK3O43293 454 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 LRCH4O75427 683 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 LDOC1O95751 146 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-209ENST00000495835 TPM3P06753 285 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 BOLA3Q53S33 107 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 SEL1L3Q68CR1 1132 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 KANSL1Q7Z3B3 1105 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 LZTR1Q8N653 840 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 KLK6Q92876 244 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 KLHL32Q96NJ5 620 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 KLC2Q9H0B6 622 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 UBA2Q9UBT2 640 aaPredicted RBP24.57■■□□□ 1.52
HLA-C-209ENST00000495835 PCSK1NQ9UHG2 260 aa24.57■■□□□ 1.52
HLA-C-209ENST00000495835 A6NNZ2 444 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 PRAMEF11O60813 436 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 UGT2B4P06133 528 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 BNIP3Q12983 259 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 SGCGQ13326 291 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 PIGHQ14442 188 aaPredicted RBP24.56■■□□□ 1.52
HLA-C-209ENST00000495835 CA9Q16790 459 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 ZSCAN23Q3MJ62 389 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 CCNI2Q6ZMN8 369 aaPredicted RBP24.56■■□□□ 1.52
HLA-C-209ENST00000495835 LEKR1Q6ZMV7 388 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 RFX8Q6ZV50 586 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 CYP4V2Q6ZWL3 525 aaPredicted RBP24.56■■□□□ 1.52
HLA-C-209ENST00000495835 DNAAF5Q86Y56 855 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 DENND6BQ8NEG7 585 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 OR6K2Q8NGY2 324 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 PEBP4Q96S96 227 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 PDFQ9HBH1 243 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 GPATCH2LQ9NWQ4 482 aa24.56■■□□□ 1.52
HLA-C-209ENST00000495835 NEMP1O14524 444 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 ENC1O14682 589 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 AREL1O15033 823 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 PAK4O96013 591 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-209ENST00000495835 GKP32189 559 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 CSNK1DP48730 415 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 MAPK8IP2Q13387 824 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-209ENST00000495835 CYTH1Q15438 398 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 ATXN7L2Q5T6C5 722 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-209ENST00000495835 AFMIDQ63HM1 303 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 KYAT3Q6YP21 454 aaKnown RBP24.55■■□□□ 1.52
HLA-C-209ENST00000495835 GCNT7Q6ZNI0 430 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 TTC7BQ86TV6 843 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 CNDP2Q96KP4 475 aaKnown RBP24.55■■□□□ 1.52
HLA-C-209ENST00000495835 KCTD15Q96SI1 283 aaPredicted RBP24.55■■□□□ 1.52
HLA-C-209ENST00000495835 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.55■■□□□ 1.52
HLA-C-209ENST00000495835 TRIM7Q9C029 511 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 ZWILCHQ9H900 591 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 GPR27Q9NS67 375 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 MYO1AQ9UBC5 1043 aa24.55■■□□□ 1.52
HLA-C-209ENST00000495835 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.55■■□□□ 1.52
HLA-C-209ENST00000495835 ERCC2P18074 760 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 ABL2P42684 1182 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 RFTN1Q14699 578 aaPredicted RBP24.54■■□□□ 1.52
HLA-C-209ENST00000495835 SMAD1Q15797 465 aaKnown RBP24.54■■□□□ 1.52
HLA-C-209ENST00000495835 EID2Q8N6I1 236 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 NIPA2Q8N8Q9 360 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 OR13H1Q8NG92 308 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 BMFQ96LC9 184 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 SLC39A8Q9C0K1 460 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 IFNKQ9P0W0 207 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 LHX3Q9UBR4 397 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 CA5BQ9Y2D0 317 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 PLXNB3Q9ULL4 1909 aa24.54■■□□□ 1.52
HLA-C-209ENST00000495835 ARID1BQ8NFD5 2236 aaPredicted RBP24.53■■□□□ 1.52
HLA-C-209ENST00000495835 FPGTO14772 594 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 RABIFP47224 123 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 PAPOLAP51003 745 aaKnown RBP24.53■■□□□ 1.52
HLA-C-209ENST00000495835 ILKQ13418 452 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 FGL2Q14314 439 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 DPYSL2Q16555 572 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 PPP6R3Q5H9R7 873 aaPredicted RBP24.53■■□□□ 1.52
HLA-C-209ENST00000495835 CPLX3Q8WVH0 158 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 TSC1Q92574 1164 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 ZNF641Q96N77 438 aaPredicted RBP24.53■■□□□ 1.52
HLA-C-209ENST00000495835 TUBGCP5Q96RT8 1024 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 MYOCQ99972 504 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 FZD3Q9NPG1 666 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 ZMIZ1Q9ULJ6 1067 aa24.53■■□□□ 1.52
HLA-C-209ENST00000495835 IGLON5A6NGN9 336 aa24.52■■□□□ 1.52
HLA-C-209ENST00000495835 J3KR12 359 aa24.52■■□□□ 1.52
HLA-C-209ENST00000495835 TOR1BO14657 336 aa24.52■■□□□ 1.52
HLA-C-209ENST00000495835 GYPCP04921 128 aa24.52■■□□□ 1.52
HLA-C-209ENST00000495835 HNRNPH3P31942 346 aaKnown RBP24.52■■□□□ 1.52
HLA-C-209ENST00000495835 NSUN2Q08J23 767 aaKnown RBP eCLIP24.52■■□□□ 1.52
HLA-C-209ENST00000495835 ELP6Q0PNE2 266 aa24.52■■□□□ 1.52
HLA-C-209ENST00000495835 Q6ZSR6 202 aa24.52■■□□□ 1.52
HLA-C-209ENST00000495835 TEKT4Q8WW24 435 aa24.52■■□□□ 1.52
HLA-C-209ENST00000495835 KLF6Q99612 283 aaPredicted RBP24.52■■□□□ 1.52
HLA-C-209ENST00000495835 C1QTNF7Q9BXJ2 289 aa24.52■■□□□ 1.52
HLA-C-209ENST00000495835 CALN1Q9BXU9 219 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms