RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PTP4A2Q12974 167 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 TPRG1LQ5T0D9 272 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 ZCCHC8Q6NZY4 707 aaKnown RBP22.42■■□□□ 1.18
HDDC3-203ENST00000494993 LEKR1Q6ZMV7 388 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 CCDC185Q8N715 623 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 IFI44Q8TCB0 444 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 FAM172AQ8WUF8 416 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 OSBPL1AQ9BXW6 950 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 NLRC4Q9NPP4 1024 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 FAM207AQ9NSI2 230 aaPredicted RBP22.42■■□□□ 1.18
HDDC3-203ENST00000494993 KLF15Q9UIH9 416 aa22.42■■□□□ 1.18
HDDC3-203ENST00000494993 EPHB6O15197 1021 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 AQP9O43315 295 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 CSO75390 466 aaKnown RBP22.41■■□□□ 1.18
HDDC3-203ENST00000494993 POP4O95707 220 aaKnown RBP22.41■■□□□ 1.18
HDDC3-203ENST00000494993 UNGP13051 313 aaPredicted RBP22.41■■□□□ 1.18
HDDC3-203ENST00000494993 GSCP56915 257 aaPredicted RBP22.41■■□□□ 1.18
HDDC3-203ENST00000494993 PFN3P60673 137 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 KRT31Q15323 416 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 MYLK3Q32MK0 819 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 CDKAL1Q5VV42 579 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 ENOX1Q8TC92 643 aaKnown RBP22.41■■□□□ 1.18
HDDC3-203ENST00000494993 MAPK15Q8TD08 544 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 NTAN1Q96AB6 310 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 ARHGEF26Q96DR7 871 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 ZNF578Q96N58 590 aaPredicted RBP22.41■■□□□ 1.18
HDDC3-203ENST00000494993 KLHL32Q96NJ5 620 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 ABCG4Q9H172 646 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 LRP4O75096 1905 aa22.41■■□□□ 1.18
HDDC3-203ENST00000494993 ZSCAN5CA6NGD5 496 aaPredicted RBP22.4■■□□□ 1.18
HDDC3-203ENST00000494993 ATXN7O15265 892 aaPredicted RBP22.4■■□□□ 1.18
HDDC3-203ENST00000494993 KDELR3O43731 214 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 MPOP05164 745 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 KRT3P12035 628 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 JUNDP17535 347 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 TLE3Q04726 772 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 EIF2B5Q13144 721 aaKnown RBP22.4■■□□□ 1.18
HDDC3-203ENST00000494993 ATXN7L2Q5T6C5 722 aaPredicted RBP22.4■■□□□ 1.18
HDDC3-203ENST00000494993 SPACA3Q8IXA5 215 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 PCDHB18PQ96TA0 734 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 NCKIPSDQ9NZQ3 722 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 DAAM1Q9Y4D1 1078 aa22.4■■□□□ 1.18
HDDC3-203ENST00000494993 RIOK3O14730 519 aaKnown RBP22.39■■□□□ 1.17
HDDC3-203ENST00000494993 AREL1O15033 823 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 LZTS3O60299 673 aaPredicted RBP22.39■■□□□ 1.17
HDDC3-203ENST00000494993 USP12O75317 370 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 DXOO77932 396 aaKnown RBP22.39■■□□□ 1.17
HDDC3-203ENST00000494993 TMCC1O94876 653 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 TPM2P07951 284 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 RFC1P35251 1148 aaPredicted RBP22.39■■□□□ 1.17
HDDC3-203ENST00000494993 STAT1P42224 750 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 NSFP46459 744 aaKnown RBP22.39■■□□□ 1.17
HDDC3-203ENST00000494993 PCBP4P57723 403 aaKnown RBP22.39■■□□□ 1.17
HDDC3-203ENST00000494993 GABREP78334 506 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 CDKN3Q16667 212 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 DEFB133Q30KQ1 61 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 FKBP15Q5T1M5 1219 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 GDPD4Q6W3E5 623 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 LSMEM2Q8N112 164 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 ZNF248Q8NDW4 579 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 LMX1AQ8TE12 382 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 BTN2A2Q8WVV5 523 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 SLC39A7Q92504 469 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 CENPTQ96BT3 561 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 GDAP1L1Q96MZ0 367 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 LGMNQ99538 433 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 SELENOOQ9BVL4 669 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 ADAM22Q9P0K1 906 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 SALL4Q9UJQ4 1053 aa22.39■■□□□ 1.17
HDDC3-203ENST00000494993 MGAQ8IWI9 3026 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 TK2O00142 265 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 TPP1O14773 563 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 BUB1O43683 1085 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 PRB1P04280 392 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 GPD1P21695 349 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 IGFALSP35858 605 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 LSSP48449 732 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 THOP1P52888 689 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 LRRC73Q5JTD7 316 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 GUSBP11Q6P575 273 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 WDR59Q6PJI9 974 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 GPR155Q7Z3F1 870 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 SLFN11Q7Z7L1 901 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 TTC7BQ86TV6 843 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 ZNF354CQ86Y25 554 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 HIC2Q96JB3 615 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 IL12RB2Q99665 862 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 TTYH3Q9C0H2 523 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 NOL6Q9H6R4 1146 aaKnown RBP22.38■■□□□ 1.17
HDDC3-203ENST00000494993 POLR1BQ9H9Y6 1135 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 SPASTQ9UBP0 616 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 SIK3Q9Y2K2 1263 aa22.38■■□□□ 1.17
HDDC3-203ENST00000494993 KALRNO60229 2985 aa22.37■■□□□ 1.17
HDDC3-203ENST00000494993 CPED1A4D0V7 1026 aa22.37■■□□□ 1.17
HDDC3-203ENST00000494993 EME2A4GXA9 379 aaPredicted RBP22.37■■□□□ 1.17
HDDC3-203ENST00000494993 IGSF6O95976 241 aa22.37■■□□□ 1.17
HDDC3-203ENST00000494993 CALB1P05937 261 aa22.37■■□□□ 1.17
HDDC3-203ENST00000494993 TGM2P21980 687 aa22.37■■□□□ 1.17
HDDC3-203ENST00000494993 RAD51Q06609 339 aa22.37■■□□□ 1.17
HDDC3-203ENST00000494993 PTK2BQ14289 1009 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms